Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2228 ATGTGGTCAAAATCCATAGCTCGTCATGATTGGGTTATGACTCCTCCTTTTAAAAACACAACCAAGGAGGCGTCATTATCTCTTGAGCCGATCTATAACTTGGTCAAAGAAAAGGTGGTGATGGATAATGGCATAGTGAAAGTATACTTAGCTAATCCAGGAGGATTTGTCACTACAATACAATACAATGACGTTGATAACATTCTTGAAGTTCTTAACGACACAGATGACAGAGGTGTGGTGGGAACAAGTCCTGGAGTAGCGAAAGTGGAAAATGAGGAACAGACTCTTAATGCACTGCAGGTGGATGACAAGTATGAATACTCGTGTGACAACAAAGATCTCAAGGTTCACGGGTCGATTAGCTACGAAGGAGAAACTGAAGCTCCAATGGGTTTTTGGGTAATCATACCTAGCGATGAATTCCGATCAGGTGGACCTGTTAAACAGAACCTCACCTCTCATGTGGGCCCCATAAGCCTCGCTGTTCGGGTAAATAACTCAGAAGCAAACCCACCTTTATTCACAAGTGGAGTGATTGGGAAGGAGAACACAATAGCCAGACATGGAATTCATGGGCTATATTACAAGGCACTCTCTTCTGCAGGGGAATCATACCTTTTTTTCTAA 630 0.4286 MWSKSIARHDWVMTPPFKNTTKEASLSLEPIYNLVKEKVVMDNGIVKVYLANPGGFVTTIQYNDVDNILEVLNDTDDRGVVGTSPGVAKVENEEQTLNALQVDDKYEYSCDNKDLKVHGSISYEGETEAPMGFWVIIPSDEFRSGGPVKQNLTSHVGPISLAVRVNNSEANPPLFTSGVIGKENTIARHGIHGLYYKALSSAGESYLFF 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2228 209 Gene3D - 67 205 IPR014718 GO:0030246
Acco10g2228 209 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 93 163 - -
Acco10g2228 209 Pfam Rhamnogalacturonate lyase family 34 80 IPR010325 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2228 Acco-ChrAcco10 34264130 34268492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2228 39 79 Polysaccharide Lyase AT1G09910 58.537 3.18e-09 54.3