Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco10g2227 | ATGATGATGTTGATCCTCACCAACTGTTTCCTGTTCTTCTTGCTGCTGCTGGTTTTGGTTCTGGGCTATGTCTCTTATCCAGGAGTGCGATTGGAAATTCAAGATAAGCATATTGTGATGGATAATGGCATAGTCCAAGTCATCTTATCAAATCCTGGAGGATCAGTCACCGGAATCCAATACAATGGAATTGACAATTTGCTTGAAGTCCAAAACATGGAATTTGACAGAGGTTACTGGGATGTTGTATGGAGCGAGGCTGGTAAAAATGGAACAAAGGGCACATTGGATAGGTTGGAAGCCACAAATTTTACAGTAATTGTTCAAAATGAAGAACAGTTAGAGTTGTCATTCACCAGAATGTGGCTGCCTTCCCTTGAGGGAAAGATTCCGCCCCTCAGTATCGATAAAAGATTTATAATGCTTCGTGGTTCATCGGGCTTCTACACTTACGCCATATACGAGCATTTGAAGGGATGGCCTGCCTTCAATCTTGATAATACTCGGATTGCATTTAAGCTTCGGAAAGATAAGTTCCATTACATGGTTGTAGCAGACGATAGGCAAAGATTCATGCCTCTGCCTGATGACCGGTTGAAAGGAAGAGGACAAGTTCTAGCCTATCCTGAAGCTGTCCTCCTTGTCGATCCTGTTGAGCCTGAATTCAAAGGGGAGGTGGATGACAAATATCAGTACTCGTGCGAGAGTCGCAACAACAGGGTTCATGGCTGGATATGTACGGATCAATCGGTTGGGTTCTGGCAAATTACGCCCAGTTATGAGTTCCGATCTGCTGGGCCCCTCAAGCAATACATCACTTCTCACGTGGGCCCCACCATACTCTCTGTATTTCACAGCACGCATTATTCAGGAGCAGATCTAGTAATGAAATTCGGGGCCGAAGAAGAATGGAAGAAAGTGTATGGGCCCATTTTCATATACCTTAATTCTTTGTCTAACGGAGAAAGCCCGACCACGCTATGGGAAGACGCTAAAAAGCAGACGGTCAATGAAATAGAAAGGTGGCCCTATACATTTCCAGCTTCACAAGACTTTCCCTCATCTTACCAGCGAGGCAAGGTTAAAGGGAGATTACTGGTACAAGACAGGTATATCACTGATGGGTGTGTCCCAGCGAGTGGGGCTTATGTGGGATTAGCTGCAACTGGAGATGCAGGATCTTGGCAGAGAGAATGCAAGGGTTATCAATTTTGGACTATCACTGATGATAGAGGCTACTTCACAGTCACTGACATATGGGCTGGGCAGTATAATCTTTACTCCTGGGTCAATGGGTTTGTCGGCGATTATCGATATGACAATGTCATAAACATAACCTCAGGTTGTGAAGTTGATGTGGGGGAACTTGTTTATGAGCCTCCGAGAGATGGCCCTACATTGTGGGAAATAGGCATCCCTGATCGCACTGCAGCTGAATTCTATATCCCAGATCCAAATCCCAAGTACATTAACAGACTTTATGTCAAACATCCAGATAGGTATAGGCAATATGGATTGTGGGAGAGGTATGCAAATTTGTATCCAAATGAAGACTTGGTCTACAATATAGGAACCAGTGACTTCAAAAAAGATTGGTTTTTCGCTCAAGTTAATAGGAAGATAGATAACAACACATACCAAGAAACCACATGGCGAATTAATTTCAAGCTTGATTGTGTAAATACCAACGGAACCTACAAATTGCGATTGGCTTTAGCATCTGTACACTCTGCTGAGCTGCAAGTTCGGTTAAATAACTCAGAAGCAAACCCACCTTTGTTCACAAGTGGAGTGATTGGGAAGGAGAACACAATAGCCAGACATGGAATTCATGGGCTATATTGGCTGTTCAACGTTGATGTACAAGGCACTCTTCTTGTGCAGGGGAATAATACCTTTTTTCTAAAGCAACCAAGAAACATAAGTCCTTTTCAAGGGATTTTGTATGATTATATTCGTTTAGAAGGCCCCTCTTCTGTGACTAGTAACATATGA | 1995 | 0.4321 | MMMLILTNCFLFFLLLLVLVLGYVSYPGVRLEIQDKHIVMDNGIVQVILSNPGGSVTGIQYNGIDNLLEVQNMEFDRGYWDVVWSEAGKNGTKGTLDRLEATNFTVIVQNEEQLELSFTRMWLPSLEGKIPPLSIDKRFIMLRGSSGFYTYAIYEHLKGWPAFNLDNTRIAFKLRKDKFHYMVVADDRQRFMPLPDDRLKGRGQVLAYPEAVLLVDPVEPEFKGEVDDKYQYSCESRNNRVHGWICTDQSVGFWQITPSYEFRSAGPLKQYITSHVGPTILSVFHSTHYSGADLVMKFGAEEEWKKVYGPIFIYLNSLSNGESPTTLWEDAKKQTVNEIERWPYTFPASQDFPSSYQRGKVKGRLLVQDRYITDGCVPASGAYVGLAATGDAGSWQRECKGYQFWTITDDRGYFTVTDIWAGQYNLYSWVNGFVGDYRYDNVINITSGCEVDVGELVYEPPRDGPTLWEIGIPDRTAAEFYIPDPNPKYINRLYVKHPDRYRQYGLWERYANLYPNEDLVYNIGTSDFKKDWFFAQVNRKIDNNTYQETTWRINFKLDCVNTNGTYKLRLALASVHSAELQVRLNNSEANPPLFTSGVIGKENTIARHGIHGLYWLFNVDVQGTLLVQGNNTFFLKQPRNISPFQGILYDYIRLEGPSSVTSNI | 664 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco10g2227 | 664 | CDD | RGL4_C | 468 | 655 | - | - | |
Acco10g2227 | 664 | CDD | RGL4_M | 357 | 456 | IPR029413 | - | |
Acco10g2227 | 664 | CDD | RGL4_N | 29 | 317 | - | - | |
Acco10g2227 | 664 | PANTHER | RHAMNOGALACTURONATE LYASE FAMILY PROTEIN | 34 | 658 | - | - | |
Acco10g2227 | 664 | FunFam | Rhamnogalacturonate lyase B | 354 | 453 | - | - | |
Acco10g2227 | 664 | Pfam | Polysaccharide lyase family 4, domain II | 380 | 452 | IPR029413 | - | |
Acco10g2227 | 664 | Pfam | Polysaccharide lyase family 4, domain III | 466 | 654 | IPR029411 | - | |
Acco10g2227 | 664 | SUPERFAMILY | Galactose mutarotase-like | 36 | 319 | IPR011013 | GO:0003824|GO:0005975|GO:0030246 | |
Acco10g2227 | 664 | SUPERFAMILY | Galactose-binding domain-like | 463 | 655 | IPR008979 | - | |
Acco10g2227 | 664 | Gene3D | - | 354 | 453 | - | - | |
Acco10g2227 | 664 | Gene3D | - | 31 | 328 | IPR014718 | GO:0030246 | |
Acco10g2227 | 664 | Gene3D | - | 464 | 655 | - | - | |
Acco10g2227 | 664 | Pfam | Rhamnogalacturonate lyase family | 32 | 226 | IPR010325 | - | |
Acco10g2227 | 664 | SUPERFAMILY | Starch-binding domain-like | 355 | 452 | IPR013784 | GO:0030246 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco10g2227 | Acco-ChrAcco10 | 34251785 | 34263806 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco10g2227 | 29 | 658 | Polysaccharide Lyase | AT1G09890 | 65.931 | 0.0 | 874 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco10g2227 | 10 | 34251785 | 34263806 | Acco10g2227 | 10 | 34251785 | 34263806 | ECH |