Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2198 ATGACTCCTTTCTTGTGTCCTTCATCCTCCAGCATGTTCCTCTCTCTCTTCTGTCTCGTTTTCTTTCTCTCCGGTGTTCAATCCAACGACCGTCAACTCCTTCTCAACTTGAAATCTTCACTCCAACATGAGTCAAACTCCCCTGTTTTTAACTCCTGGAATTCCACCAACTCCGTCTGCAATTTCTATGGGATTTCCTGTAACTCCAACGGCTCGGTGACGGACATCGATCTTTCTTCTCAGAATCTTTCTGGGGTTCTGCCTCTTGACTCCATTTGCGAGCTCCCATCTCTGCATAAGCTCGCATTCGGATTCAACTCCTTGCATGGGAGAGTTGCAGAGGATTTGAGAAACTGTGTCAACTTAGTATACTTAGACTTGGGAAACAACAATTTCTCAGGGCCATTTCCTGATATATCTCCTCTCAGCCAATTGCAATATTTGTTTTTGAACCAGAGTGGATTTTCTGGAACTTTCCCATGGAAGTCTCTGCTAAACATGACGGGTCTCGTGCAGCTAAGTGTTGGAGACAACCCATTTCACCTCACACCTTTCCCAACTGAGTTGGTCAATCTTAAAAGCCTCCAATGGCTCTATCTAACAAATTGTGGTCTCGGAGGGGAAATACCAGCAGGAATAGGTAATCTCACTCAGCTTATAAATTTAGAGTTTTCGGATAATTTTATATCCGGCGAGATTCCTTCAGAGATTGGGAATCTTGGGAAGTTATGGCAGTTGGAGTTCTACAACAACTCAATAACTGGGAAATTTCCAGTCGGGTTCAGAAATCTCACAAGCCTTGCGAAATTCGACGGATCAATTAATCAGCTTGAAGGCGATCTTTCCGAGTTGAAATTCTTGACGAATCTGGTTTCCCTACAGCTGTTTGAAAATAAGTTAACAGGGGAAATTCCAACTGAGTTCGGTGAATTCAAAAAGCTCGTGAATCTCTCTTTGTACACTAATCAATTGTCAGGGCCCATTCCTCAAAAACTTGGGTCTTGGGCAGAGTTTGATTTCATTGACGTGTCAGAGAACATGTTGACGGGTCCTATTCCGCCTTATATGTGCAGCAAGGGAAAGATGCATAAACTACTTGTACTTCAAAACAAGCTCTCTGGGGAAATACCAGCTACTTATGCGAACTGCACAACATTGATTCGGTTCAGAGTCAACGATAACTTGCTTTCGGGGACGATTCCTTCTGGAATATGGGGATTGCCAAACGCGGAGATAATCGATGTTGAATTGAATCAGTTGGAAGGTTCAATTACGTCAGATATCAAGAACGCGAAGACCTTAGCCACTTTACATGCTAAAAGGAACCGCTTGTCCGGTGAGATACCGAGAGAAATTTCAGAAGCAACGTCCTTGGTGACAATTGATCTAAGTGAGAATCAGATTTCCGGGGAAATTCCAATGGGTATTGGGGAGCTGAAAAGTTTGAGCAGTCTTCATTTACAGAGGAACAGGTTATCTGGGTCTATACCTGACTCTTTGGGGTTATGTACTTTCCTTAGTGATATCGAACTGGAAGAGAATTCACTCTCTGGAAATATCCCTTCATCTTTGGGTAATTTACCAGCTCTTAATGCATTGAATTTGTCCCAAAACGAACTCTCCGGTGAGATTCCGGCGAGTTTCACACTCCTCCGGTTGAGCCTCTTTGATCTATCGAACAACCAATTAACAGGTCCAATCCCACAATCTCTTTCAATTCAAGCTTTCAATGGTAGTCTTGATGGAAACCCAGGTCTGTGCACTCTTGACGCGATCAACTCTTTTAGGCCTTGCGCTGCTCATACAGGCATCCCTAGAAGCGTCCGTACACTCATCCTTTGCTTCACAATCGCTTTGATTTTGCTTCTTGTTTGTTTGGCTCTTTACATGAAGCTAAATAAGAAGGAAAAATATCGGGAACGGTCTTTGAAGGAAGAATCATGGGACCTAAAATCCTTCCACGTGCTGAGTTTCACTGAGGACGAGATTCTAGATTCCATTAAGCAAGAGAATCTCATAGGGACAGGAGGATCAGGAAGCGTGTATAAAGTCCCACTCTCAAACGGTAAAGAACTCGCCGTTAAGCACATATTCCATATGGATCCTGCTGGCCGGAAGAAGAGCCGGAGTAGTACTCCGATGATCGGAAAGCACAACGGGAAGTCCAAGTCAAAGGAATTTGATGCAGAGGTGCGGACACTGAGCTCTGTAAGACATGTGAACGTCGTGAAGCTTTACTGCAGCATCACAAGCGAGGATTCTAGCTTGCTTGTTTATGAGTATCTTCCCAATGGAAGCTTATGGGATCGACTTCATGCAAGTGGGAAGATAGAACTAGACTGGGAAAAGAGATATGAAATCGCACTTGGAGCCGCCAAGGGATTAGAGTACTTACATCACGGGTGTGAGAAGCCAGTGATTCACAGAGACGTCAAATCTAGTAACATTTTGTTGGATGAGTTCATGAAGCCTAGGATTGCTGATTTTGGACTTGCCAAGATTGTTCAGCCCAATGTTAGCCACGATTCGACACAAGTCATTGCAGGAACACATGGGTATATTGCTCCCGAATATGGGTACACATATAAAGTGAACGAGAAAAGTGACGTGTACAGCTTCGGAGTGGTATTGATGGAGCTGATAACAGGGAAAAGGCCAATAGAAGCAGAGTGTGGGGAAAACAAAGACATAGTGAGCAGGGTTTGGAGCAAGATGCAGAGGGAAGAGAGCATAATGAGTGTGGTGGATTCTAGAATACCAGATATGTATAAAGAGGAGGCTGTGAAGATGTTGAGAATAGCGATTCTGTGTACGGCAAGGCTTCCTGCTTTAAGGCCTACCATGAGGAGTGTGGTTCAAATGCTTGAGGATGTCGAGCCTTGTAAATTAGTTGGAATCGTCATCAGCAAAGATGGCACTGAAAAGAAAATGCAGGACCCTCACAAGCCTAAGCTCAAGCCAAGCACTTGA 2970 0.4407 MTPFLCPSSSSMFLSLFCLVFFLSGVQSNDRQLLLNLKSSLQHESNSPVFNSWNSTNSVCNFYGISCNSNGSVTDIDLSSQNLSGVLPLDSICELPSLHKLAFGFNSLHGRVAEDLRNCVNLVYLDLGNNNFSGPFPDISPLSQLQYLFLNQSGFSGTFPWKSLLNMTGLVQLSVGDNPFHLTPFPTELVNLKSLQWLYLTNCGLGGEIPAGIGNLTQLINLEFSDNFISGEIPSEIGNLGKLWQLEFYNNSITGKFPVGFRNLTSLAKFDGSINQLEGDLSELKFLTNLVSLQLFENKLTGEIPTEFGEFKKLVNLSLYTNQLSGPIPQKLGSWAEFDFIDVSENMLTGPIPPYMCSKGKMHKLLVLQNKLSGEIPATYANCTTLIRFRVNDNLLSGTIPSGIWGLPNAEIIDVELNQLEGSITSDIKNAKTLATLHAKRNRLSGEIPREISEATSLVTIDLSENQISGEIPMGIGELKSLSSLHLQRNRLSGSIPDSLGLCTFLSDIELEENSLSGNIPSSLGNLPALNALNLSQNELSGEIPASFTLLRLSLFDLSNNQLTGPIPQSLSIQAFNGSLDGNPGLCTLDAINSFRPCAAHTGIPRSVRTLILCFTIALILLLVCLALYMKLNKKEKYRERSLKEESWDLKSFHVLSFTEDEILDSIKQENLIGTGGSGSVYKVPLSNGKELAVKHIFHMDPAGRKKSRSSTPMIGKHNGKSKSKEFDAEVRTLSSVRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHASGKIELDWEKRYEIALGAAKGLEYLHHGCEKPVIHRDVKSSNILLDEFMKPRIADFGLAKIVQPNVSHDSTQVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELITGKRPIEAECGENKDIVSRVWSKMQREESIMSVVDSRIPDMYKEEAVKMLRIAILCTARLPALRPTMRSVVQMLEDVEPCKLVGIVISKDGTEKKMQDPHKPKLKPST 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2198 989 Gene3D Transferase(Phosphotransferase) domain 1 762 965 - -
Acco10g2198 989 MobiDBLite consensus disorder prediction 703 722 - -
Acco10g2198 989 Pfam Protein kinase domain 669 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2198 989 SUPERFAMILY L domain-like 284 597 - -
Acco10g2198 989 ProSiteProfiles Protein kinase domain profile. 667 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2198 989 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Acco10g2198 989 Gene3D Ribonuclease Inhibitor 356 602 IPR032675 -
Acco10g2198 989 Gene3D Ribonuclease Inhibitor 286 355 IPR032675 -
Acco10g2198 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Acco10g2198 989 Gene3D Ribonuclease Inhibitor 184 285 IPR032675 -
Acco10g2198 989 SMART LRR_typ_2 192 216 IPR003591 -
Acco10g2198 989 SMART LRR_typ_2 479 503 IPR003591 -
Acco10g2198 989 SMART LRR_typ_2 287 311 IPR003591 -
Acco10g2198 989 SMART LRR_typ_2 550 578 IPR003591 -
Acco10g2198 989 FunFam Probable inactive receptor kinase RLK902 27 186 - -
Acco10g2198 989 FunFam Leucine-rich receptor-like protein kinase family protein 187 283 - -
Acco10g2198 989 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Acco10g2198 989 CDD STKc_IRAK 673 956 - -
Acco10g2198 989 FunFam Receptor-like protein kinase HAIKU2 650 761 - -
Acco10g2198 989 SUPERFAMILY Protein kinase-like (PK-like) 658 956 IPR011009 -
Acco10g2198 989 SMART serkin_6 667 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2198 989 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 213 - -
Acco10g2198 989 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 762 970 - -
Acco10g2198 989 FunFam Leucine-rich repeat receptor-like protein kinase TDR 284 600 - -
Acco10g2198 989 Gene3D Phosphorylase Kinase; domain 1 650 761 - -
Acco10g2198 989 SUPERFAMILY L domain-like 50 357 - -
Acco10g2198 989 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2198 Acco-ChrAcco10 34018809 34021864 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2198 14 975 Receptor kinase-like Gene Family AT1G09970 61.737 0.0 1165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco10g2198 Pkinase 4.7e-44 CL0016