Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2184 ATGTCTTCCCGGCAAATATCCAAACCACATCAACAAACTGGAACGTCCCAAATGTCCAGAATTCCTCTACTTGTTTTTACTTTTCGAGTGCTTTTCTTCGTCCTCCTCAGCTTCTCAGTGACCTGTAGTGCAGATTCGCGAACCACAGGCTCCGAACAGAACATCCTACTCATCGTTAAACATCAACTGGGCAATCCACCGTCGCTTCGGTCGTGGACCTCATCATCCTCGCCGTGCGATTGGTCAGAGATACGTTGCGCCGATGGCGTTGTCACTCAGGTTCTTCTCTCAGGAAAAGGTATCTCCCGGAAGCTACCGCCAGCGATCTGCGACCTCAAGAATCTGACGAAGCTCGACCTCTCAAACAATAACATCCGCGGAGAGTTTTCGAGATTTTTGTACAATTGCTCCAACCTACAATTCCTTGCTCTCTCTCAAAATTACTTCGCTGGTCCAATCCCCGACGACATTGACAGACTCTCAACTCTGACGTTCTTAGACCTTAGTGGCAACTCTTTTTCTGGCGATGTCCCGCCGGCCATCGGGAGATTATCGGAGTTACAAACGTTGTACCTCCACAGCAACGAATTTGATGGAACTTTTCCCAAAGAAATTGGGAGTTTATCAAATCTCGAAATTCTCACTTTGGCCTATAATGACAAATTTGTGCCCATGGCGATCCCATCGGAGTTTGGGAACTTGAGGAATTTGACGTTCATCTGGATGACAGGCTGCAATTTAATCGGTGAAGTTCCTGAAAGTTTTGGCAATCTAACAAATATCGTGCAATTGGATTTGTCAATGAACAATTTGATAGGCAGCATTCCCAGTAGTTTGTTCTCTCTCAAGAATTTACAGTTTCTTTATCTGTACCACAACAGATTGTCTGGTGAAATACCTAGTTCTATCCAGGCTCTGAATTTGATTGACATTGATCTGGCAATGAACAATTTCACAGGTCCGATTCCTGAAGATTTTGGAAAGTTGGAGAACTTGACGATACTTAACCTGTATTTCAATCAATTATCAGGGCAGATTACGAGAAGTTTAGGCCTAATAAAAAAGTTGAAGTACTTCAAGATTTTTGGCAATAAGTTGAATGGAACTCTTCCTCCTGAACTAGGCCTATATTCAAAGCTTGAAGCGTTTGAAGTCGCAGACAATCAACTGAGTGGTGTATTGCCTCAATATTTGTGTGCTAATAATGCTTTGCAAGGTGTGATTGCTTTTTCTAACAGTCTTGGTGGAAGATTGCCCGAATCGCTTGGAAATTGCACTACACTGCGCACTATTCAGCTTCAGAGAAACAATTTCTCTGGTGAGATTCCTGTAAGTGTCTGGACTTCCAAGAATTTATCAACCTTGATGTTGAGCGAGAACTCGTTTTCTGGTCAACTTCCTAGTAAGCTTCCATGGAATATGTCGAGACTAGAGATCAGGAATAACTACTTTTCAGGAGAGATATCGGTTGGAATTGCTTCCGCAGTAAATCTAGTTGTATTTGATGCGAGGAACAATATGCTTTCTGGTGAAATTCCCAAGAAGTTGGCGGCTCTTTCCCGGCTTAATTCTCTCAGGCTTGACAATAATCAACTTTCCGGTGAACTACCATCCGAGATAGTCTCCTGCCAATCCCTGAATACTTTAACGCTCTCGAGCAACAAACTCTCTGGGAAAATTCCGGGAACTATTGGTGATCTCCCTGATCTTGTTGACTTGGACTTGTCTAAAAATGATATATCTGGTGAAATCCCGCCTCAGCTTGGCAATATGAGGCTCAATTTTCTCAACTTGTCCTCCAACGACCTTTCTGGTAGCATCCCAGATGTTTTCAATAACCTCGCGTATGACACCAGCTTCTTGAACAATCCCAATCTATGTGCTTATAATCCAAACATCAAACTTCCAAAATGCTTGGCCAAAACTCCTCGGTATCCGAACAAATCATCCAAGTTGCTTGTCTTGATTCTTGTTCTCACCATCATTGTGCTGCTAGCCACTGCCTCACTGGCCTTCTATAAGTTCAAATACATGTCAGGAAAGAATTCCAGGCGCAACCTTTCAACGTGGAAGCTTACTTCATTCCAGAGGCTAGATTTCTCAGAATGGAATCTCTTCTCAGACCTGACAGACGAGAACCTTATTGGAAGCGGGGGCTTTGGAAAAGTTTACCGGGTTCCCTCTAATAGTCCGGGTGAGTATGTTGCTGTAAAAAGGATTTGGAATAGCAAAAGGTTGGATGATAATCTAGAGAGAGACTTTATGTCCGAGGCTGAAATCCTAGGCACAATTCGGCATTCCAATATTGTGAAGCTTCTGTGCTACATTTCAAGTGAAAACTCAAAAATCCTTGTGTATGAATACAAGGAAAATAGGAGCCTTGACAGATGGCTTCATGGAAAGAGACGAGCATTGACCACACCCAACAATCATCTGGTCTTGAAGTGGCCAACAAGGTTGAAGATTGCCATTGGGGCCGCACAAGGACTGTGTTACATGCACCACGATTGCTCTCCACCAATCATGCATAGAGACGTAAAGTGTAGCAATATATTACTGGACTCTGAATTCCGGGCGAGTCTTGCAGACTTTGGGCTAGCCAGGATTTTGGCGAAATCTGGGGAGCCGCATAGCTTGTCTGCAATAGCGGGATCTTTCGGCTACATACCCCCAGAATATGCCTATTCAACCAAGATCAACGAGAAAGTGGATGTATATAGTTTTGGAGTGGTACTACTGGAGCTTGTAACAGGAAAAGAACCCTATTGCGCAGAGGAAAGCACAAGCCTGGTAGATTGGGCATGGCAGTATCACAGTGAAGAGAAGTGCCTTGTTGATGCCTTGGACGAAGAAATCAAAGAAGCTTGTCATGTGGAAGAGATGATAAAGGTCTTTAAATTAGGCCTAGCTTGCACAAGCTTATCACCCTCAGGTAGACCTTCCATGAGAGAGATTTTGCGGGTTCTTCAGCAGTGTTGTCCACCAGATCATGACGGTAAGAAAATCGGAAGAGACTTTGATATTGCTCCCCTGCTTAGCGATTCCACGTACATTTCTAATTACAAGGACAGTAGCACGGCTATAGGTGAAAGTGATGAGAGTTATTTCTGA 3111 0.4372 MSSRQISKPHQQTGTSQMSRIPLLVFTFRVLFFVLLSFSVTCSADSRTTGSEQNILLIVKHQLGNPPSLRSWTSSSSPCDWSEIRCADGVVTQVLLSGKGISRKLPPAICDLKNLTKLDLSNNNIRGEFSRFLYNCSNLQFLALSQNYFAGPIPDDIDRLSTLTFLDLSGNSFSGDVPPAIGRLSELQTLYLHSNEFDGTFPKEIGSLSNLEILTLAYNDKFVPMAIPSEFGNLRNLTFIWMTGCNLIGEVPESFGNLTNIVQLDLSMNNLIGSIPSSLFSLKNLQFLYLYHNRLSGEIPSSIQALNLIDIDLAMNNFTGPIPEDFGKLENLTILNLYFNQLSGQITRSLGLIKKLKYFKIFGNKLNGTLPPELGLYSKLEAFEVADNQLSGVLPQYLCANNALQGVIAFSNSLGGRLPESLGNCTTLRTIQLQRNNFSGEIPVSVWTSKNLSTLMLSENSFSGQLPSKLPWNMSRLEIRNNYFSGEISVGIASAVNLVVFDARNNMLSGEIPKKLAALSRLNSLRLDNNQLSGELPSEIVSCQSLNTLTLSSNKLSGKIPGTIGDLPDLVDLDLSKNDISGEIPPQLGNMRLNFLNLSSNDLSGSIPDVFNNLAYDTSFLNNPNLCAYNPNIKLPKCLAKTPRYPNKSSKLLVLILVLTIIVLLATASLAFYKFKYMSGKNSRRNLSTWKLTSFQRLDFSEWNLFSDLTDENLIGSGGFGKVYRVPSNSPGEYVAVKRIWNSKRLDDNLERDFMSEAEILGTIRHSNIVKLLCYISSENSKILVYEYKENRSLDRWLHGKRRALTTPNNHLVLKWPTRLKIAIGAAQGLCYMHHDCSPPIMHRDVKCSNILLDSEFRASLADFGLARILAKSGEPHSLSAIAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGKEPYCAEESTSLVDWAWQYHSEEKCLVDALDEEIKEACHVEEMIKVFKLGLACTSLSPSGRPSMREILRVLQQCCPPDHDGKKIGRDFDIAPLLSDSTYISNYKDSSTAIGESDESYF 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2184 1036 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Acco10g2184 1036 Gene3D Ribonuclease Inhibitor 49 223 IPR032675 -
Acco10g2184 1036 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 305 984 - -
Acco10g2184 1036 Gene3D Ribonuclease Inhibitor 224 306 IPR032675 -
Acco10g2184 1036 ProSiteProfiles Protein kinase domain profile. 709 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2184 1036 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 49 205 - -
Acco10g2184 1036 Gene3D Ribonuclease Inhibitor 352 474 IPR032675 -
Acco10g2184 1036 Gene3D Ribonuclease Inhibitor 475 712 IPR032675 -
Acco10g2184 1036 SMART LRR_typ_2 329 353 IPR003591 -
Acco10g2184 1036 SMART LRR_typ_2 184 208 IPR003591 -
Acco10g2184 1036 SMART LRR_typ_2 258 282 IPR003591 -
Acco10g2184 1036 SMART LRR_typ_2 567 591 IPR003591 -
Acco10g2184 1036 SMART LRR_typ_2 112 136 IPR003591 -
Acco10g2184 1036 SMART LRR_typ_2 519 543 IPR003591 -
Acco10g2184 1036 SUPERFAMILY Protein kinase-like (PK-like) 699 989 IPR011009 -
Acco10g2184 1036 FunFam Kinase family with leucine-rich repeat domain-containing protein 691 788 - -
Acco10g2184 1036 FunFam Leucine-rich repeat receptor-like protein kinase TDR 326 640 - -
Acco10g2184 1036 SUPERFAMILY L domain-like 53 406 - -
Acco10g2184 1036 Pfam Protein kinase domain 711 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2184 1036 Gene3D Transferase(Phosphotransferase) domain 1 791 1002 - -
Acco10g2184 1036 FunFam Kinase family with leucine-rich repeat domain-containing protein 789 1005 - -
Acco10g2184 1036 Gene3D Phosphorylase Kinase; domain 1 715 790 - -
Acco10g2184 1036 Pfam Leucine Rich Repeat 284 306 IPR001611 GO:0005515
Acco10g2184 1036 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Acco10g2184 1036 SUPERFAMILY L domain-like 303 617 - -
Acco10g2184 1036 Gene3D Ribonuclease Inhibitor 307 351 IPR032675 -
Acco10g2184 1036 SMART serkin_6 709 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2184 1036 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 206 299 - -
Acco10g2184 1036 Pfam Leucine rich repeat 520 580 IPR001611 GO:0005515
Acco10g2184 1036 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Acco10g2184 1036 Pfam Leucine rich repeat N-terminal domain 54 86 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2184 Acco-ChrAcco10 33910278 33913477 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2184 51 991 Receptor kinase-like Gene Family AT5G25930 55.297 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco10g2184 Pkinase 3.4e-45 CL0016