Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2167 ATGGCCAAAGGAGTTCATCATCAGTTTCCAAAGTGCCTCACGTTCATATGCATTGTCATGTTGGTGTTTCATATTAATTCCACACAATCACATGGAGATCAACAAGAACAAGAACTTGAGCTTCTGTTGTCCTTCAAAGCTTTGGCCAAGGACCCAAGTCAGTCTCTTTCGAACTGGCTCAATTCTTCAGCCCCCTTCTGTAACTGGCATGGCCTCACCTGCGACCAAACCTCTTCTCAAGTTAACTCCATCCAACTCTCAGGTAAAAACATGTCCGGCACGATTTCCTCCTCCATTTTTCATCTCCCAAAAGTTACAAACATCGACCTCTCCAGCAACCAGTTCGCTGGTGAAATTTCTTTCTCCTTTCCTTCTTCCTCTCTCTCCTCACTTCTTTACCTCAATCTCAGCAACAACAACCTAACTGGCTCGTTGCCTGAGTTCTTATTTTCCGTGTCGTTTTCCGGCCTTGAATCCTTGGATCTCTCAAACAACATGTTTTCGGGGATAATTCCACATCAGGTTGGTCTTCTTTCGAGTATAAAATATCTTGATGTGGGAGGGAACGTTCTGGTTGGAAGAATTCCAAGTTCCATCACCAACATTACAGGTTTAGAATACTTGACATTGGCTTCCAACCAGTTAATAGGTGAAATCCCAAGTGACATAGGTGTCATGAAGAGCTTGAAGTGGATTTACATGGGTTACAACAATCTCTCTGGCGAAATCCCCAATAGCATAGGCAACTTATTGTCCCTGCATCATCTCGATCTTGTTTACAACAATCTCACGGGATTCATTCCTGATTCTCTTGGAAACCTCACCAGTCTTGAGTTTCTGTTTCTCTACAGAAACAACCTCATGGGTTGGATTCCTGCTTCCATTTTCAACCTGAAAAATCTTGTTTCGCTTGATCTCAGTGATAATTCTCTCTGGGGAGAGATTTCTGAACATTTTATTAACCTTCAAAGACTTGAGATTCTTCAGCTTTTCTCAAATAACTTTACTGGAAAGATTCCAAAGGCTTTAACAGCTTTACCTCGGCTTCAAGTTCTTCAACTGTGGTCCAACAGATTAACGGGAGAGATTCCAAAAGAGATTGGAATGCATAACAACCTCACTGTTCTAGACCTTTCCACCAACAACCTCTCCGGAGAGATCCCGCATGGTTTATGTGATTCGAGGAATCTTTACAAGCTCATTCTTTTCTCCAACTCTCTTGAAGGTCAAATCCCTCACAGTTTGAGCTCCTGCATAACCCTCCTCCGAGTACGCCTCCAGAACAATAAGCTTTCCAGCCAATTACCACCGGAATTCACCAAACTGCCACAGTTATACTTGTTAGATATGTCTGGCAACAAACTTTCCGGGCGGATCGATGACCGGAAGTGGGACATGCCGGCGCTTCAGTTGCTGAATTTGGCTAAAAACAATTTCTCTGGAGAGTTACCGGACTCTTTCGGGAGTAACGAACTGGAGAACCTGGACTTATCGGAGAACCAGTTTTCAGGTGATATTCCACGTGGCATGGGAAGCTTATCGGAGCTGGTGCAGTTGAAGCTGAGCAGAAACAGGCTGTCAGGTAACATCCCAAATGAACTTTCTTGGTGCAAGCAACTTGTGTCTTTAGACCTCAGTCACAATCAGCTTACCGGTCAAATACCGATTAGTCTCGGAGACATGCCAGTTCTAGGGATGCTTGATCTGTCTGAAAACCAATTGAGAGGTGAAATTCCCCAAAATTTTGGAAGTGCTGAGTCACTCGTAGAACTCAACATATCCTACAACCGTTTTCACGGGAGGTTACCGTCCACCGGAGCTTTCCTCGCCATTAATAGTAGTGACGTCACTGGGAACGACCTTTGTGAGAGTGATGACATCAGTGAGAGTAGAAGCGGTTTACCACCCTGCAACAAAAGAGAAGATAATAATAAGAACCCATTTTGGTGGTTTTTTCTGCTTGGTCTTGTAGGGTTCCCGCTTGCTGCTTTTCTTATTGTTATCTTCATACGTAGAAGACAGAACTTGGGGGTGACGACCACAAAGGTTGAAAATGAAGACGGCACATGGGAAATGAGATACTTTGACTCCGAGGCTTCAAAAATCATCACCATCCACGACGTATTATCTTCTGCAAAAGAAGGAGTACTCATAATCACTCAAGGACGAAAGGAGACAGTGCAATTCGAGGTGAAAGAGATGAGTGACCTGAATTGCTTCCCGGAGGACATCGGTAAGCTTCGGCATCCAAACATGGTTAAGTTGATGGGAATATGCAGGTGTGGGAAAGGAGGGTACTTGGTGCATGAGTATGTGGATGGGAGATATTTAAGCGACGTCGTTGGGAGTTTAAGCTGGGAACGACGACGGAATATTGCGCTTGGAATTGCAAAAGCACTCAAGCATTTGCATGTTCATGGTTCATTGTTTGCTAGTTTGGTAGGTGAGATGTCACCCCATAGAGTTGTCGTGGACTCAAAAGATGTTCCTCGTCTCATGTTGTGCCCTCTCAAGGCTTCCATTTCTTCACCTTACGTTGCTCCTGAATCGAGAAATGCGAAGGTGACAGAGAAGAGTGACATGTACGGACTAGGTGTTATTCTGATAGAATTATTGACGGGGAGAAGTTCAGTGGACGAAGAAATGGGCATGCAACACGAGAGCATCGTGGAGTGGGCCCGTTATTGTTATTCGGACTGTCATCTGGATACATGGGTCGACCCGAAGATGAAGGGCGGGATTGCGTCGTTAGCTCAAAACGACATCGTTGAGGTCATGAACCTGGCTCTCCAGTGCACAGCCACTGACCCCACAGCCAGGCCGAGCGCTAGCCACGTGTTCAAAACCCTAAACGCTCTGACTGCCTCCACATCGTCCTGTGTTTAA 2886 0.4518 MAKGVHHQFPKCLTFICIVMLVFHINSTQSHGDQQEQELELLLSFKALAKDPSQSLSNWLNSSAPFCNWHGLTCDQTSSQVNSIQLSGKNMSGTISSSIFHLPKVTNIDLSSNQFAGEISFSFPSSSLSSLLYLNLSNNNLTGSLPEFLFSVSFSGLESLDLSNNMFSGIIPHQVGLLSSIKYLDVGGNVLVGRIPSSITNITGLEYLTLASNQLIGEIPSDIGVMKSLKWIYMGYNNLSGEIPNSIGNLLSLHHLDLVYNNLTGFIPDSLGNLTSLEFLFLYRNNLMGWIPASIFNLKNLVSLDLSDNSLWGEISEHFINLQRLEILQLFSNNFTGKIPKALTALPRLQVLQLWSNRLTGEIPKEIGMHNNLTVLDLSTNNLSGEIPHGLCDSRNLYKLILFSNSLEGQIPHSLSSCITLLRVRLQNNKLSSQLPPEFTKLPQLYLLDMSGNKLSGRIDDRKWDMPALQLLNLAKNNFSGELPDSFGSNELENLDLSENQFSGDIPRGMGSLSELVQLKLSRNRLSGNIPNELSWCKQLVSLDLSHNQLTGQIPISLGDMPVLGMLDLSENQLRGEIPQNFGSAESLVELNISYNRFHGRLPSTGAFLAINSSDVTGNDLCESDDISESRSGLPPCNKREDNNKNPFWWFFLLGLVGFPLAAFLIVIFIRRRQNLGVTTTKVENEDGTWEMRYFDSEASKIITIHDVLSSAKEGVLIITQGRKETVQFEVKEMSDLNCFPEDIGKLRHPNMVKLMGICRCGKGGYLVHEYVDGRYLSDVVGSLSWERRRNIALGIAKALKHLHVHGSLFASLVGEMSPHRVVVDSKDVPRLMLCPLKASISSPYVAPESRNAKVTEKSDMYGLGVILIELLTGRSSVDEEMGMQHESIVEWARYCYSDCHLDTWVDPKMKGGIASLAQNDIVEVMNLALQCTATDPTARPSASHVFKTLNALTASTSSCV 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2167 961 SUPERFAMILY L domain-like 49 387 - -
Acco10g2167 961 SUPERFAMILY Protein kinase-like (PK-like) 744 950 IPR011009 -
Acco10g2167 961 Pfam Leucine Rich Repeat 252 274 IPR001611 GO:0005515
Acco10g2167 961 FunFam Leucine-rich repeat receptor protein kinase EMS1 245 329 - -
Acco10g2167 961 ProSiteProfiles Protein kinase domain profile. 653 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2167 961 Pfam Leucine rich repeat 300 359 IPR001611 GO:0005515
Acco10g2167 961 Pfam Leucine rich repeat 539 598 IPR001611 GO:0005515
Acco10g2167 961 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Acco10g2167 961 Gene3D Ribonuclease Inhibitor 363 630 IPR032675 -
Acco10g2167 961 FunFam Leucine-rich repeat receptor protein kinase EMS1 154 244 - -
Acco10g2167 961 Gene3D Ribonuclease Inhibitor 293 362 IPR032675 -
Acco10g2167 961 Gene3D Transferase(Phosphotransferase) domain 1 736 959 - -
Acco10g2167 961 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 155 949 - -
Acco10g2167 961 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 330 631 - -
Acco10g2167 961 FunFam Leucine-rich repeat receptor-like kinase 37 153 - -
Acco10g2167 961 SMART LRR_typ_2 561 585 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 154 178 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 128 152 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 346 370 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 372 394 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 274 298 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 250 273 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 466 489 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 202 226 IPR003591 -
Acco10g2167 961 SMART LRR_typ_2 513 537 IPR003591 -
Acco10g2167 961 Gene3D Ribonuclease Inhibitor 34 188 IPR032675 -
Acco10g2167 961 PRINTS Leucine-rich repeat signature 157 170 - -
Acco10g2167 961 PRINTS Leucine-rich repeat signature 298 311 - -
Acco10g2167 961 Gene3D Ribonuclease Inhibitor 189 292 IPR032675 -
Acco10g2167 961 SUPERFAMILY L domain-like 319 603 - -
Acco10g2167 961 Pfam Protein tyrosine and serine/threonine kinase 745 949 IPR001245 GO:0004672|GO:0006468
Acco10g2167 961 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Acco10g2167 961 ProSiteProfiles Leucine-rich repeat profile. 130 152 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2167 Acco-ChrAcco10 33790018 33792988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2167 38 950 Receptor kinase-like Gene Family AT2G25790 51.235 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Acco10g2167 PK_Tyr_Ser-Thr 7.2e-11 CL0016