Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2166 ATGAACAGAATTAATTCCCAGAAGAGAGAGGCCAATGATCTGAAAAAAGTGAGCCACAGGATGATGGCTGTGAGTAAAGATGGGAGCAAGGTGGGAATAGACAACGGCAAGTATGTGAGGTACACGCCGGAGCAGGTTGAAGCTCTGGAGAGGCTTTATCATGAATGTCCTAAGCCCAGTTCCATGCGTCGCCACCAGCTCATCAGAGAATGCCCCATTCTCTCTAATATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGATGTAGAGAGAAGCAGAGGAAGGAATCGTTCCGGCTGCAAGCTGTGAACAGGAAGCTGACGGCCATGAATAAACTACTGATGGAGGAAAATGAGAGACTGCAGAAGCAAGTGTCACGACTGGTTTATGAGAACAGCTTTTTCCGCCAACAGACACAGAATGCGACCCTTGCTACGACGGACACAAGCTGTGAGTCGGTGGTAACCAGCGGTCAGCACCATGTGACCCCTCAGCATCCACCAAGGGATGCCAGCCCTGCTGGACTTTTGTCCATCGCAGAGGAGACTTTAGCAGAGTTTCTTTCGAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCTATTGGAATCGTTGCTATTTCTCATGATTGCCCTGGAGTGGCAGCACGAGCCTGCGGCCTTGTGGGTCTGGAACCTACCAGGGTTGCGGAAATACTCAAAGATAGGCCCTCGTGGTTTCGTGATTGCCGAGCCTTGGACGTTCTGAATGTGATGCCCACTGGAAATGGGGGAACCATTGAAATGCTTTACATGCAGTTTTATTCACCAACAACTTTGGCTCCTGCTCGTGACTTTTGGTTGCTGCGCTACACATCTGTTTTGGAGGACGGCAGTCTAGTGGTCTGTGAAAGATCACTTAACAACATCCAGAATGGACCTACAGTGCCACCAGTGCAGCACTTTGTTAGGGCAGACATGCTGCCTAGTGGGTATCTGATTAGACCTTGTGAAGGGGGCGGATCCATTATTCATATTGTTGATCACATGGACTTGGAGCCTTGGAGTGTCCCTGAAGTGTTGCGCCCACTTTACGAGTCATCAACGCTGCATGCTCAAAAGACAACAATGGCGGCCTTACGTCATTTGAGGCAGATCTCTCAAGAAGCTTCTCAACCAAATGTCTCCGGATGGGGGCGAAGGCCAGCAGCTCTACGTGCGCTTAGCCAGCGATTGAGCAAGGGATTCAATGAAGCAGTCAACGGGTTTGCTGATGATGGCTGGTCCATGCTAGAAAGTGATGGCATTGATGATGTCACCCTTCTGGTGAATTCATCTCCCAACAAGATGGTGGGTGCCAATTTTGTTCAGAGCAATGGATTTCCTTATGTGAGCACTTCCGTGCTATGTGCCAAAGCGTCAATGTTGCTCCAGAATGTACCTCCAGCAATTCTTCTCAGATTCTTGCGGGAGCACAGATCAGAGTGGGCAGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGGTCCCTGTAGCTTGCCTGGAGCCCTAGCAGGAAGTTTTGGGGGTCAGGTTATTCTGCCTCTGGCTCACACTATTGAGCATGAAGAGTTCATGGAGGTCATTAAGTTTGAAAACATGGGTTACTACAGGGATGACATGACTATACTTGAGGATGTTTTCCTCTTACAACTTTGTAATGGAGCAGATGAGCATGCAAATGGTTCCTATGCAGAACTCATTTTTGCTCCTATTGATGCATCTTTCTCAGATGATGCACCTATATTACCTTCTGGCTTTCGCATCATAGTTCTCAATTCTAACACGGATGCTTCAAGTTCAAATCGTACACTTGATCTTGCTTCTGCTCTTGAAGTTAAAACCACAGCAAACAAAGCAGGCACTGGCAATGACAATAATGGTAACACAAAATCTGTGATGACAATGGCATTCCAATTTGCATTTGAAGTCCACCTTCAGGACAGCGTAGCCTCTATGGCCCGGCAGTATGTCCGCAGCATCATTGCATCTGTTCAAAGGGTTGCATTAGCTCTCTCCCCTTTGCATTTTGGTTCTCGTAATGGTTTGCATGCTCCAACTGGGCCTCCTGAGGCACAAACACTTGCTCGTTGGATTTGTCAAAGCCATAGATGCTATCTAGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCGGTCCTGTGCTGCTCTTTGAAGGCTTTACCCACGTTCACATTCGCCAATCAAGCTGGACTTGACATGCTTGAGACAACTTTGGTGGCTCTTCAAGACATCACTCTGGAAAAAATCTTTGATGACAGTGGAAAGAAAACCCTTTTCTCTGAGTTCCCCCATATAATGCAACAGGGATTTATGTGCATGCAAGGTGGGATCTGCTTATCCAGCATGGGAAGGCCAGTGTCGTATGAGAGAGCAGTGGCATGGAAAGTGTTGAACGAAGAAGAAGTGGCCCAAAGCATATGTTTCATGTTCATCAACTGGTCTTTTGTCTGA 2568 0.479 MNRINSQKREANDLKKVSHRMMAVSKDGSKVGIDNGKYVRYTPEQVEALERLYHECPKPSSMRRHQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESFRLQAVNRKLTAMNKLLMEENERLQKQVSRLVYENSFFRQQTQNATLATTDTSCESVVTSGQHHVTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCPGVAARACGLVGLEPTRVAEILKDRPSWFRDCRALDVLNVMPTGNGGTIEMLYMQFYSPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNIQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEASQPNVSGWGRRPAALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPNKMVGANFVQSNGFPYVSTSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAGPCSLPGALAGSFGGQVILPLAHTIEHEEFMEVIKFENMGYYRDDMTILEDVFLLQLCNGADEHANGSYAELIFAPIDASFSDDAPILPSGFRIIVLNSNTDASSSNRTLDLASALEVKTTANKAGTGNDNNGNTKSVMTMAFQFAFEVHLQDSVASMARQYVRSIIASVQRVALALSPLHFGSRNGLHAPTGPPEAQTLARWICQSHRCYLGVELLKCEGSESILKSLWHHSDAVLCCSLKALPTFTFANQAGLDMLETTLVALQDITLEKIFDDSGKKTLFSEFPHIMQQGFMCMQGGICLSSMGRPVSYERAVAWKVLNEEEVAQSICFMFINWSFV 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2166 855 SUPERFAMILY Bet v1-like 180 392 - -
Acco10g2166 855 Pfam MEKHLA domain 714 854 IPR013978 -
Acco10g2166 855 SUPERFAMILY Homeodomain-like 36 98 IPR009057 -
Acco10g2166 855 SMART START_1 180 390 IPR002913 GO:0008289
Acco10g2166 855 FunFam Homeobox-leucine zipper protein REVOLUTA 37 92 - -
Acco10g2166 855 Coils Coil 102 133 - -
Acco10g2166 855 Gene3D - 31 101 - -
Acco10g2166 855 Pfam Homeodomain 37 95 IPR001356 GO:0003677
Acco10g2166 855 CDD homeodomain 37 97 IPR001356 GO:0003677
Acco10g2166 855 ProSiteProfiles 'Homeobox' domain profile. 32 96 IPR001356 GO:0003677
Acco10g2166 855 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 33 855 IPR044830 GO:0003700
Acco10g2166 855 Gene3D - 211 396 IPR023393 -
Acco10g2166 855 ProSiteProfiles START domain profile. 171 385 IPR002913 GO:0008289
Acco10g2166 855 CDD bZIP 89 128 - -
Acco10g2166 855 SMART HOX_1 34 100 IPR001356 GO:0003677
Acco10g2166 855 CDD START_ArGLABRA2_like 175 390 - -
Acco10g2166 855 Pfam START domain 181 389 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2166 Acco-ChrAcco10 33777133 33783606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2166 33 855 Homeobox Transcription Factor Family AT4G32880 78.476 0.0 1347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco10g2166 START 5e-51 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2166 10 33777133 33783606 Acco10g2166 10 33777133 33783606 ECH