Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2151 ATGACTGCAGAAACCCAGAATTCTGAAACAGAGAGCACGTCAAACTCAAGCTCATTCCCATCTTCTCCTACCTCCCCACACAGTCTTCCTTCGGCTCTGCCTCTCCAAAACTCTGTTTCGCAAGCTAAAGCTGAAAGCCCGGAATCTAAAAGGGTAAAGAGAATTCGAGACTCCAGCAAGCACCCTGTATACAGAGGGGTCCGTATGCGAAATTGGGGTAAATGGGTGTCTGAAATTCGTGAGCCTCGCAAGAAGTCGCGAATATGGCTGGGTACATTTCCGACGCCGGAAATGGCAGCCAGAGCACATGACGTCGCTGCTCTGAGCATCAAAGGCAGCTCTACTATTCTCAATTTCCCGGAGCTGATCGACCTTCTTCCTCGTCCCGTGTCGCTCGCTCCTCGAGACGTACAGGCAGCGGCAGCGAAGGCTGCTCAAATGGATAAGTTCGACCTGCCGACATCATCGTCCTCTTCATCACTGTCGTCGCTTGTTTCAGCAATGGACTTGGGAACAGAGTCGGAGGAACTGAGCGAGATAATAAAGCTGCCAAACTTGGAAACGAGCGAGGCAGTGGAATTGATGAAGGAGTTTGTGTACGTGGACTCGGAAGAGGGATGGATGTACGAGCCACCATGGTTACAGAGCATGGAGGATTATGACGGGTATGTCGCCAATCAGCTGTGGAATTACTGA 696 0.5115 MTAETQNSETESTSNSSSFPSSPTSPHSLPSALPLQNSVSQAKAESPESKRVKRIRDSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSTILNFPELIDLLPRPVSLAPRDVQAAAAKAAQMDKFDLPTSSSSSSLSSLVSAMDLGTESEELSEIIKLPNLETSEAVELMKEFVYVDSEEGWMYEPPWLQSMEDYDGYVANQLWNY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2151 231 ProSiteProfiles AP2/ERF domain profile. 63 120 IPR001471 GO:0003700|GO:0006355
Acco10g2151 231 FunFam Ethylene-responsive transcription factor 2 62 121 - -
Acco10g2151 231 SMART rav1_2 63 126 IPR001471 GO:0003700|GO:0006355
Acco10g2151 231 SUPERFAMILY DNA-binding domain 63 121 IPR016177 GO:0003677
Acco10g2151 231 Pfam AP2 domain 62 112 IPR001471 GO:0003700|GO:0006355
Acco10g2151 231 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Acco10g2151 231 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Acco10g2151 231 PRINTS Ethylene responsive element binding protein signature 86 102 IPR001471 GO:0003700|GO:0006355
Acco10g2151 231 MobiDBLite consensus disorder prediction 1 45 - -
Acco10g2151 231 MobiDBLite consensus disorder prediction 1 60 - -
Acco10g2151 231 MobiDBLite consensus disorder prediction 46 60 - -
Acco10g2151 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 22 193 - -
Acco10g2151 231 Gene3D AP2/ERF domain 63 121 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2151 Acco-ChrAcco10 33675612 33676307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2151 37 223 AP2-EREBP Transcription Factor Family AT5G11590 64.500 2.11e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco10g2151 AP2 2.6e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2151 10 33675612 33676307 Acco10g2151 10 33675612 33676307 ECH