Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2147 ATGGCAGCTTCATATACGGCGTTTACAGTGAAATGCTCTGTTCAGAAAAAATCCAGCTGTGTCTCCCGCAATTTTTACCACTTCAACATACCACTTTCCTCTTCTTTCAAGCCGATCCTTGGATCTCTTCCTCAAATCCCTTTGCAAATTGATATAGCCAAAACCCTGACCGGTTTCACAGCTAAAATACTGGACGCTTTTGTGGATTCAGTCTTTGAGTTCATTGACCATCCATTGCTCCCATCTCAGAGTAACTTTGTTCCTGTGGAGCAGTTGGAGGAAGCCATGCTTATCACAGACCTAGAAGATGTCCCACATGATTTTCCAGAGGGTGTCTATGTTAGAAATGGTCCAAATCCATTATTTGGAGGATTGAAAACAGCCAAATCTATCTTTGGAAGGTCAAGTCACGTTTGGGTTGAAGGAGAAGGAATGCTTCATGCTTTGTATTTTAAGAAAGCAAGCGATGGCAACTGGACGGTCATCTACAAAAACAGATATGTAGAAACTGAAACTTACAAGCTAGAGAAACAAAGAAATAAGCCTTCCTTTCTGCCAGCCATAGGAGGCGATTCACCTGCCATTTTGTCTGCTTATCTCCTAAACTGGTTAAGATTTGGAAAAGTGAATAAATACATTAGCAACACCAACGTGTTTGAGCATTATGGGAAGTTTTACTCCGTTGCTGAAAATCACATCCCACAAGAGATCGACATCATCACCCTCAAAACCTTGAGAAATTGGGATATCAATGGAGCGGGGAATCGACCTTTTATAAGCCACCCGAAGAAAGCTCCAGGTACAGGAGAGTTAATTATAATGGGGGTGTCTCCAACTAAGCCTTTTGCTACACTTGGAATCATTTCTGATGATGGAAAGAAATTGATTCATAAAGTGGATATCAAATTGAATAGGTGCAGTCTTTGTCATGAAATAGGCATTACACAACGGTTCAATGTGATCATGGATTTTCCGCTAACCTTGGATCTAAACAGACTTATGAGAGGAGGCTCATTAATAGAGTATAATAAGGAGGGGTACGCAAGAATAGGGGTAATGCCTCGCTATGGTGATGCCAACTCAATCCAATGGTTTGATGTGAAACCTAATTGCACATTTCACATCATCAATTCTTTTGAGGATGCCCATGAGGTTGTAGTGTGGGGATGTAGAGCTCTTGGTTCGGTAGTTCCTCGGGTTGACCCTAGTTTGAATCCATTTGAGGCATTCTCTCGTTGTTATGAGTGGAGATTGAATCTGCAAAGTGGGGAAGTTAAGGAGAAGGATCTCGGTGGAACTAAAGTATTGAATATGGATTTTCCTATGATTAATGCAAATTTTATAGGCATTAAGAATAGATATGGATACACTCAAATGGTTGATCCAGAAGCTAGCACCAGTGCAGGAGTGCCTAAATATGGGGGCCTAGCCAAGCTCTACTTTGAAAAACCATGCATGGATTTATCAACGAATAACAAACAGCATGAAGAACCTATAAAGGTGGAATACCACATGTTTGAGAAGAATGTATTTTGCACAGGAGCATCCTTTGTCCCTAAAAGTGATGGAGGTGAAGAACACGATGGTTGGATCATCACTTTTATTCACAACGAAGACACTGACATATCTCAAGCTCGTATAATTGACACAAGAAAGTTCTCAGGAGACGCAGTTGCTAAAATTACAATTCCTGTACGAGTTCCTTATGGTTTTCATGGAGCTTTCATGCCAATGGGCAAAAAAGGCACCTCAGGAATCAGATTTGGTAGGCAAGAACAAGATATACCAAAGATGAGTGAGTGTTTGGTGGTGTTCGTTATGATTCTTTCATTGTCGTTGGACGTGAAATCTCAGGGAACACCAGAGAGCATGCAAGATAATATGCCTCAAAACATCCATCCAAGTAAAGGAGTCATAATAGGAATCCTCACTGTTATGTTTGTGATATCATTTGTCCTGATGGCTTATGTAAAGTTCTGTAAAATCCGGTCCACTGAGTCCCTTAACCAAGATATGAACGATCCAGGAATAGGTCGATCCAGGTCAGGATATTCCGGGATAGACAAACAAGTAATCGAATCACTGCCTTTTTTCAAGTTCTCTTCCCTCAAGGGCTCAAAAGAAGGCCTAGAATGTGCCGTTTGCTTGTCGAAATTCGACGCCGCCGAGGTTCTTAGGTTGCTGCCCAAGTGTAAGCATGCTTTTCACATGAATTGCATCGACAAGTGGCTTGAATGTCACTCGACATGTCCTCTTTGCAGGTACAAGGTTGACCCAGAGGACATCAAGACATTCAATTCGTCCATCAGCTCCAGATTCCTTCGAGTTCCTTCCGACATAACAGATGTCCCTGAGCTTGAAATCTTCGTCCAGAGGGATCAATCAAACCAGAACTCAAACACATTTAACAATCGGAAACCTGCGCACAGGCTCAATCATAAAATAGTCATATCCGATGTCGCTACGAGGAGCAGGTGGAGCGATCTTAATTCCTCAGACTTGCTGTCGTTGAATTCTGAGATTCTCAGTGCGATGTCGAGCGCGACATTCTCTGGTTCCAACGAGGAAGACAACTCGTTTACGTTGTTGACTGCTCCGGGAGAGAAGAGATCTATGTCGGAGATAGCCAACGTGGCGAGATTTGCAGAAATTAGAGCGGAGAACAATGTGAGGGAAGAGAGAGTGAGAAGGATTTGGTTGCCGATGGTGGAGCGAACAGTGCAGTGGTTTGCGAGACGAGAGAGCGTATTATCGACGGAATCGAAACACACAGGATTTGCTTCAAATGTTTGA 2793 0.4257 MAASYTAFTVKCSVQKKSSCVSRNFYHFNIPLSSSFKPILGSLPQIPLQIDIAKTLTGFTAKILDAFVDSVFEFIDHPLLPSQSNFVPVEQLEEAMLITDLEDVPHDFPEGVYVRNGPNPLFGGLKTAKSIFGRSSHVWVEGEGMLHALYFKKASDGNWTVIYKNRYVETETYKLEKQRNKPSFLPAIGGDSPAILSAYLLNWLRFGKVNKYISNTNVFEHYGKFYSVAENHIPQEIDIITLKTLRNWDINGAGNRPFISHPKKAPGTGELIIMGVSPTKPFATLGIISDDGKKLIHKVDIKLNRCSLCHEIGITQRFNVIMDFPLTLDLNRLMRGGSLIEYNKEGYARIGVMPRYGDANSIQWFDVKPNCTFHIINSFEDAHEVVVWGCRALGSVVPRVDPSLNPFEAFSRCYEWRLNLQSGEVKEKDLGGTKVLNMDFPMINANFIGIKNRYGYTQMVDPEASTSAGVPKYGGLAKLYFEKPCMDLSTNNKQHEEPIKVEYHMFEKNVFCTGASFVPKSDGGEEHDGWIITFIHNEDTDISQARIIDTRKFSGDAVAKITIPVRVPYGFHGAFMPMGKKGTSGIRFGRQEQDIPKMSECLVVFVMILSLSLDVKSQGTPESMQDNMPQNIHPSKGVIIGILTVMFVISFVLMAYVKFCKIRSTESLNQDMNDPGIGRSRSGYSGIDKQVIESLPFFKFSSLKGSKEGLECAVCLSKFDAAEVLRLLPKCKHAFHMNCIDKWLECHSTCPLCRYKVDPEDIKTFNSSISSRFLRVPSDITDVPELEIFVQRDQSNQNSNTFNNRKPAHRLNHKIVISDVATRSRWSDLNSSDLLSLNSEILSAMSSATFSGSNEEDNSFTLLTAPGEKRSMSEIANVARFAEIRAENNVREERVRRIWLPMVERTVQWFARRESVLSTESKHTGFASNV 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2147 930 FunFam RING-H2 finger protein ATL43 687 761 - -
Acco10g2147 930 SUPERFAMILY RING/U-box 690 759 - -
Acco10g2147 930 SMART ring_2 712 753 IPR001841 -
Acco10g2147 930 Pfam Retinal pigment epithelial membrane protein 103 577 IPR004294 GO:0016702
Acco10g2147 930 Pfam Ring finger domain 711 754 IPR001841 -
Acco10g2147 930 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 686 762 IPR013083 -
Acco10g2147 930 ProSiteProfiles Zinc finger RING-type profile. 712 754 IPR001841 -
Acco10g2147 930 PANTHER BETA-CAROTENE DIOXYGENASE 101 576 IPR004294 GO:0016702
Acco10g2147 930 CDD RING-H2_EL5-like 711 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2147 Acco-ChrAcco10 33644031 33649407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2147 634 914 C3H Transcription Factor Family AT2G20030 38.938 1.87e-66 226