Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2142 ATGGTAGTGTCTTCCTCGGAGTCTCCCAGGACAGATTCCCGATCAGCTCACCGCCATTTATGGTGGAAATATGTGCTTAGAGTGCACGATGTTTTGTTGTCTTTAGTATTTGACCGTTTTATTGTGTACTCAGTGAAGGCCTTGACCATAGTTCCTGAAATTCACTCCGAAACTTTGAGTAGTTCGACATTAACGTTGGATTTTCAAGCGAAATGGCCGATTGATGTTGACAGTTGCCTACCATTGTTGATGGAGCAGAGTGAAACAATTTCTGAGTTTGCACCGCGGAAATTTGTTCGGCAATTGGATTTCACGGCCATCGGCGGAGATTCAGTGAACGTAGAATTGCCGAGGGCACCTGAATCTATGACTCATTTAGAACTACCACCGCAGACGCAGAAACCACTGCCACAATCGATTTTGCCGCCACAATCATTATCGCCGTCTCAAATACAAATTGAACCGAAGTTGCAGTCGCAGGCATACTCACCGACACAATCAAAGTTGCCTCTACGGTCGCCGGGGCAGCAGCTATGGTCATCTTTACACACACAACAACAGCGACCACCGCAATCTCAGGTCAACCAGCAATCGCAACCGCGGCCGCAGCTAGTTTCACCTGCTCGTCGAATTCCGCACCCCGTGCAGAAAATTTCGATGACGACGTTACCATTACTGAAGCAAGAGTCTCCAAGTAAACGACCTTTGCATATTGTGGGATCACAAGACATCACTCCAAAGAAACAAAAGCAGTGCAACTGCAAGAATTCTCGATGCCTCAAATTGTACTGCGAGTGTTTTGCAGCTGGTATACACTGTGATGGCTGCAACTGTTTAAATTGTCATAATAATGTGGATAATGAGGCCGCCAGACAAGAGGCAGTTGGAATAATTTTAGAGCGCAATCCAAATGCGTTCAGACCAAAAATTGCAAACAGTCCACAAGAACCACGGGGTTTCAAGGAAGAGGCGGAAATTCAAGTATTAGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGTTTCCAAGCCAATGTCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGAAGAAAGAATTGCTCTGGATCCAATGAACCTCAAACAGGCAGCCAATGCTGCCATCAGTCAAGCAATTGGGTCCTCTGGCTATGGGATGGACATAACACCCAAGAGAAGAAAACTTAAGGAAATAATTTCTGGCAAAGTTACCATAGATCAAGCTGTTTTGACAGCTCAATTCCAACAGGAAAATGATCCAGTGGTTGTGACACCTGGTCCATCTGCGTCTGTTGCCTCTGACGTTGCCAATGTAACAATTCCTGGGTCTTCAAGATCAACATACAGGTCCCCATTGGCGGATGCTCTCCAGCTACAGGATGTGAAGCATCTCTGTTCACTTTTTGTTGTTCTATCAGGATTAGCCGCAGAGTCATATGCAGAGTCAAGAGGCAGGGTAGACCAGCAAATGGGGATGAAGAAATCTGAAACTTTTGTTGCTGCATCAGCTGAATTACTGCAAGACAACAATAAAGAAGTCCACAAGCCTGTTGTTGATGATCATGCAAAGAAAAATGGAGCAGAGAGAAGTGGAACTAGTGATTCTGGATCAGAAGGAGTTGATGTACAGAACTACGGGAGGCCGTTGTCACCGGGAACACTAGCATTGATGTGTAATGAACAAGATGAGATGTTTCTTCCGAATAGTGCTGCCAATGCTGTGGCTTGCAATGATCAAAAAATGATTCATAAGCCATCAAATTCTGATGTTTTCATGGACATTTATGGAGAGCAGGAACGGCTTGTGCTCACCAGGTTTTGGGACGTTCTCCGTGGACTCATCACTCGCGGAAGCGTAAGAGAAGCGATGTGCTCCCCATCAGCCAATAAAGAGGTGGGAAGCAAACAAGAAGCAGCTGATAATGGCAATAATGGAGCTGAAACTGATTTGAGAAGTAAGAAGGGGAAAGGAGTTCACATACACAGCAATTGCATAGCAAATTCCCACATCCCATTAGCCACTAAAGTATCTGAGACAAGTAGTGCAATGCCTAATGGACAAGACAATGATGACCTATCATTGAGGATCGGTCTGCCTACTGGAATTGCTGGGTTGATATAA 2169 0.4486 MVVSSSESPRTDSRSAHRHLWWKYVLRVHDVLLSLVFDRFIVYSVKALTIVPEIHSETLSSSTLTLDFQAKWPIDVDSCLPLLMEQSETISEFAPRKFVRQLDFTAIGGDSVNVELPRAPESMTHLELPPQTQKPLPQSILPPQSLSPSQIQIEPKLQSQAYSPTQSKLPLRSPGQQLWSSLHTQQQRPPQSQVNQQSQPRPQLVSPARRIPHPVQKISMTTLPLLKQESPSKRPLHIVGSQDITPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAARQEAVGIILERNPNAFRPKIANSPQEPRGFKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCMDCKNFEGSEERIALDPMNLKQAANAAISQAIGSSGYGMDITPKRRKLKEIISGKVTIDQAVLTAQFQQENDPVVVTPGPSASVASDVANVTIPGSSRSTYRSPLADALQLQDVKHLCSLFVVLSGLAAESYAESRGRVDQQMGMKKSETFVAASAELLQDNNKEVHKPVVDDHAKKNGAERSGTSDSGSEGVDVQNYGRPLSPGTLALMCNEQDEMFLPNSAANAVACNDQKMIHKPSNSDVFMDIYGEQERLVLTRFWDVLRGLITRGSVREAMCSPSANKEVGSKQEAADNGNNGAETDLRSKKGKGVHIHSNCIANSHIPLATKVSETSSAMPNGQDNDDLSLRIGLPTGIAGLI 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2142 722 MobiDBLite consensus disorder prediction 126 204 - -
Acco10g2142 722 SMART CXC_2 331 372 IPR033467 -
Acco10g2142 722 SMART CXC_2 247 287 IPR033467 -
Acco10g2142 722 MobiDBLite consensus disorder prediction 645 662 - -
Acco10g2142 722 MobiDBLite consensus disorder prediction 125 213 - -
Acco10g2142 722 MobiDBLite consensus disorder prediction 640 669 - -
Acco10g2142 722 MobiDBLite consensus disorder prediction 525 544 - -
Acco10g2142 722 ProSiteProfiles CRC domain profile. 248 371 IPR005172 -
Acco10g2142 722 MobiDBLite consensus disorder prediction 525 561 - -
Acco10g2142 722 PANTHER TESMIN/TSO1-RELATED 130 628 IPR028307 -
Acco10g2142 722 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 334 368 IPR005172 -
Acco10g2142 722 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 249 284 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2142 Acco-ChrAcco10 33592100 33597582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2142 93 640 CPP Transcription Factor Family AT4G29000 43.386 6.49e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Acco10g2142 TCR 2.9e-12 No_clan