Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2112 ATGCAAAAGGAGAAGGAATCAAGCTGTAGGGAGATGGAGATGAGTGGAGGGAAAGAGGAAACCCTGCCACCAGGATTTAGATTCCATCCTTCAGATGAAGAGCTTATCACTTACTATCTCATGAACAAGATCTCTGATTCTAGCTTCACTGGAAGAGCTATTGCTGATGTTGATCTCAACAAATGCGAGCCTTGGGACCTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAATGGTACTTCTTCAGCCTGAGAGATCGCAAGTACCCAACTGGAGTGAGAACGAATCGAGCAACCAACACAGGCTACTGGAAAACCACTGGCAAAGACAGGGAAATCATCAACACCACCACGTCGGAGCTCCTTGGCATGAAGAAGACTTTGGTTTTCTACAAAGGCAGAGCCCCTAGAGGCGAGAAAACCAACTGGGTCATGCACGAATACCGCATCCACTCTAAATCCAACAAGCAAGATGAATGGGCGGTATGTCGAGTGTTTCAGAAGAGTGGGACAAGTATGGTAAAGAAATTTCCTTCCAACCATACAAGAGGATCTCTGAATCCTTATGGCCTGGACATTGCAAGTTTTGCAGGTGGTGCCACTATTAACATTCCACAACCCATGAATCTGATGCATCAGCTTGGAGATCCAGCAGCTCATTTCCTTTACGGAAGGAATATTAATAATAATAATGGTTACATGATGAATCATTCTGTGCCAAGCAATGGGACTACTTCTCTGAACCTACCAATGCAACAATATAATTTCAACTATCCAGTTACTGCATCAGGAGGGTTCAGTATCTCAGGTCTAAATTTGAATCTGGGAAATGCGTCATCAGTTGCAGTAGGTGATGGAGCAACACCTACGTCATCATCCCAACCCTTTTTGCGACCACTCAATAACCAGCACGATTTGGTGAGTTCTAACAACGTTGTCACACCTGTCACTTCTCTTGTCGCAGACAACCTAGGAGGAGGCTATGGCGTGGATATCAGCAACGTCGCCAATCCTCAGACTCAGATCAGCAGTAATAGGTATATGGGCATGGCGGATCACTGTGTGGACCTCGATGCTTACTGGCCTTCCTACTGA 1092 0.4597 MQKEKESSCREMEMSGGKEETLPPGFRFHPSDEELITYYLMNKISDSSFTGRAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDREIINTTTSELLGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSNKQDEWAVCRVFQKSGTSMVKKFPSNHTRGSLNPYGLDIASFAGGATINIPQPMNLMHQLGDPAAHFLYGRNINNNNGYMMNHSVPSNGTTSLNLPMQQYNFNYPVTASGGFSISGLNLNLGNASSVAVGDGATPTSSSQPFLRPLNNQHDLVSSNNVVTPVTSLVADNLGGGYGVDISNVANPQTQISSNRYMGMADHCVDLDAYWPSY 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2112 363 MobiDBLite consensus disorder prediction 1 26 - -
Acco10g2112 363 Gene3D NAC domain 31 171 IPR036093 GO:0003677|GO:0006355
Acco10g2112 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 234 - -
Acco10g2112 363 MobiDBLite consensus disorder prediction 1 17 - -
Acco10g2112 363 ProSiteProfiles NAC domain profile. 22 167 IPR003441 GO:0003677|GO:0006355
Acco10g2112 363 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Acco10g2112 363 SUPERFAMILY NAC domain 15 167 IPR036093 GO:0003677|GO:0006355
Acco10g2112 363 FunFam NAC domain-containing protein 100-like 31 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2112 Acco-ChrAcco10 33345546 33347449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2112 18 363 NAC Transcription Factor Family AT2G24430 48.603 1.16e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco10g2112 NAM 1.8e-40 No_clan