Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2108 ATGGGGATAGCAGAAGCATGCTCCAGGATTATTGGAGACTTTTTACAAGCTTTTAGACGTTCACTAGAAAGCTCAAAGACTCAAGTAATTGATCACAATGATCCTCCCTGTAAGCCCCAGAATGTTATCAGACTTGATGACAAGATGGTGAGTGCTCTAATCACTGTGTTTGGCATGGAAAACAATGGAAGAATCAAGAAGGAAAACGCAAGGCAAGTGGTAGAGAAGCTGGGTTTGCTGTATGGTTCAGAGGAAGATAAATCCTCAGAGTTTGAACTTCCTAGCCAGGAAGATGAAGAGGTTCTGGTAGAAGAAGTGCTCGATGGATTGGAGGATATGTCGAAGCGCAGAGAGCTGTTACACGAGGCCTTCGAAATCTTCGACGAAGATGGAGATGGATACATAGATGCAATGGAGTTGAAGAGGGTTCTGGATTGCTTGGGTTTGGATAAAGGTTGGGACATGAGGGCCATTGAGAAAATGGTGAATGTTGTAGATTTGAACTTTGATGGTAAGGTTGATTTCAATGAGTTTGAGTTGATGATGGGCTGCACAAAGATTGGGGTAATTAGGAAACATAAAATAAGTACTCTAATACATGACAAAATACAACTGAAGCCATACTTAATGGACATAGAGATTAGAAAGGAGAGAAAGAAGAAAACATTAGACAAAACAGAACCTACTAATCTAACTAGAAAGGAGGATATAAAGTTCGATCTAATTGTGGGGGAGTGA 738 0.4065 MGIAEACSRIIGDFLQAFRRSLESSKTQVIDHNDPPCKPQNVIRLDDKMVSALITVFGMENNGRIKKENARQVVEKLGLLYGSEEDKSSEFELPSQEDEEVLVEEVLDGLEDMSKRRELLHEAFEIFDEDGDGYIDAMELKRVLDCLGLDKGWDMRAIEKMVNVVDLNFDGKVDFNEFELMMGCTKIGVIRKHKISTLIHDKIQLKPYLMDIEIRKERKKKTLDKTEPTNLTRKEDIKFDLIVGE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2108 245 CDD EFh 120 178 IPR002048 GO:0005509
Acco10g2108 245 ProSiteProfiles EF-hand calcium-binding domain profile. 153 188 IPR002048 GO:0005509
Acco10g2108 245 ProSitePatterns EF-hand calcium-binding domain. 128 140 IPR018247 -
Acco10g2108 245 Pfam EF-hand domain pair 118 182 IPR002048 GO:0005509
Acco10g2108 245 SUPERFAMILY EF-hand 53 182 IPR011992 -
Acco10g2108 245 SMART efh_1 119 147 IPR002048 GO:0005509
Acco10g2108 245 SMART efh_1 157 185 IPR002048 GO:0005509
Acco10g2108 245 Gene3D - 13 185 - -
Acco10g2108 245 PANTHER CALCIUM BINDING PROTEIN 114 182 - -
Acco10g2108 245 ProSiteProfiles EF-hand calcium-binding domain profile. 115 150 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2108 Acco-ChrAcco10 33315794 33316648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2108 120 182 EF-hand Containing Proteins AT5G44460 55.556 5.64e-16 72.0