Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2107 ATGATGGAGGCGAAGCCGGCCGCCGTCTTGCCTACGTGCACCGCCGCTCAGTCCCAATCCCAATCCATGCACGCGTCGTCCGTTCTCACCGGCGTATGCAACATGAAACGGACGCCGTCTGAGTTGGCCCTGGAAGAGTTCCTCAACAAGGCGGTGTCGTCGACCAACGACGAGGACGTGAAACCGTGCGAGCTTTGGGGTCAAAGAGACAAAAGTTTCGCCGACGCGGACGCATTTCTTGCCGGAGACGAATTCGATCGCGCTTTCCGAAACTCGGATGCAGTGACTGCTTTTTCAAGTTGCAAGGGACTAGCAGATTCACTGTTATGGTCTCCGAATGAGACTCCCAAGGATTCACCTGTGTGTGCCACGATTGAATCTCAGTCGTCTATCTGTGGTACTGCTGTTTGCAGCCCTGCGTCAGCTAATCAAGCAACAACACTTGGAGAAAATCAAGCCAAAGGAACCACAAGTGCTTCGTCTCTTGAACAATCTGATGAGGATGACGTAGCTGGTCCTTGTGATCAGAGCACAAACCCCATTGATATGAAGCGCTTCAGAAGGAAGGTTTCTAATCGCGAATCTGCCAGGAGATCCAGAAGAAGAAAACAAGCGCATCTGGCTGATCTTGAGTTACAGGGTGAGCAACTGAGATTGGAGAATGCAGCTCTCTACAAGCAGCTTACAGATGCCAGCCAACAATTCCGCGAGGCTAACACAAATAACCGAGTTCTGAAATCAGAAGTCGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAAGATATGCTGACTAGGGGTTCCTTCTCCACCTTAAACAATCCTCTTGTTCAGAATCAGAGTCAGCTAAACGCAGCACCACAACGTCGACACGGCATGGCACACGTCTCGCCCACCATCGCCGTCCATGGAAGTGATGCCTCATATGCTGTTGCAGTTGATGATCACAATCCATCTCTTGGTCTTGGAAACTTACATATCAGCAACGCCAACTTCAACTCTGGAGTTGTTATCAGTGATGCTATGAGCTGTATCAATGATATTTATCGCTGA 1050 0.499 MMEAKPAAVLPTCTAAQSQSQSMHASSVLTGVCNMKRTPSELALEEFLNKAVSSTNDEDVKPCELWGQRDKSFADADAFLAGDEFDRAFRNSDAVTAFSSCKGLADSLLWSPNETPKDSPVCATIESQSSICGTAVCSPASANQATTLGENQAKGTTSASSLEQSDEDDVAGPCDQSTNPIDMKRFRRKVSNRESARRSRRRKQAHLADLELQGEQLRLENAALYKQLTDASQQFREANTNNRVLKSEVEALRAKVKLAEDMLTRGSFSTLNNPLVQNQSQLNAAPQRRHGMAHVSPTIAVHGSDASYAVAVDDHNPSLGLGNLHISNANFNSGVVISDAMSCINDIYR 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2107 349 PANTHER BASIC LEUCINE ZIPPER 63 16 323 - -
Acco10g2107 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Acco10g2107 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 245 IPR004827 GO:0003700|GO:0006355
Acco10g2107 349 FunFam BZIP transcription factor 182 233 - -
Acco10g2107 349 MobiDBLite consensus disorder prediction 151 165 - -
Acco10g2107 349 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Acco10g2107 349 Pfam bZIP transcription factor 183 233 IPR004827 GO:0003700|GO:0006355
Acco10g2107 349 SUPERFAMILY Leucine zipper domain 184 234 IPR046347 GO:0003700|GO:0006355
Acco10g2107 349 Coils Coil 193 262 - -
Acco10g2107 349 MobiDBLite consensus disorder prediction 151 183 - -
Acco10g2107 349 Gene3D - 183 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2107 Acco-ChrAcco10 33312636 33315788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2107 35 348 bZIP Transcription Factor Family AT5G24800 40.312 5.32e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco10g2107 bZIP_1 1.7e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2107 10 33312636 33315788 Acco10g2107 10 33312636 33315788 ECH