Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2106 ATGGCGACAACGTCGGTGCTGCTATGCACCGGTCTAGCGGCGGTGATAAGCAGCACCTACAGCATGAAGAAGCCACTGAACGACGCCGTGTACGGAGCTCACGGCGAGTTCATGGTGGCGCTCAAATACGTCACCTTACTTGGCTTGTTCATATTCTCTTTCTTCTGCCACTCTCTCTCCATCAGGTTCATCAACCAAGTCAACATCCTGGTCAACGCGCCACTAGACGCCACGTCATTGGTCACAGCCTCTTATATCCACCTCATCTTAGAGAGAGGCGTCACCCTCAACACCGTCGGGAACAGAATCTTCTATGCCGCACTTCCTCTCCTGCTCTGGATTTTTGGTCCTCTCCTCGTATTCCTCTGTACTCTTACTATGATTCCTGTTCTTTACAACCTCGATTTCCTCTTCTCTGCCTCTACCAACAACACCAAGACCGATCACGCCAATCAGAATGCCCTCTCGGTACGCTGCGTTTTAAACCTCTCACCAAACTTCCGCAGTTGTCTCATTTCCTTCGACGTTCACGACTCACATACGGCTCTCGGCCCTGCTTGCGTCCACTCCCCCTGGTCGACGCTACTCCAGTCTTGCCGGCCGCCGCAAAGTCTCGAGAAGTTTGTGGAAGCAGTGAAAATGTCTTCCTCGTATCTCCCTGCTACAACGGAGACTCTTGCACAGGCACTGGAGGCCAAAACCCCATCTGAGGGGATCTCTATTCTCTATCGTGTACTTGAGAATCCCTCTGCTTCTCCCGAAGCTCTGCGCATTAAAGAGCAAGCCATCACAAACCTCTCCGATCTTCTCAGGCAAGAGAATAGGGCAGAGGATCTGCGCAGCCTTCTCAATCATTTGAGGCCATTCTTTTCCTTAATCCCTAAGGCAAAAACTGCAAAAATAGTGAGGGGAATAATTGATTCTGTTGCTAAAATACCGGGGACATCTGATCTACAAATTGCACTCTGCAAAGAAATGGTGCAGTGGACTCGAGCTGAAAAGCGTACCTTTCTGAGGCAGCGGGTTGAGGCAAGGCTTGCAGCTCTTCTTATGGAAAATAAGGACTATGCAGAAGCGTTGACCCTCCTTACTGGCCTGGTCAAAGAGGTTAGAAGACTGGATGACAAACTTCTTCTTGTGGACATAGACTTGCTGGAAAGCAAGCTGCACTTCTCCTTAAGGAACCTTCCAAAGGCAAAAGCTGCCCTCACAGCAGCAAGAACAGCTGCAAATGCTATTTATGTGCCCCCTGCTCAGCAAGGTGCCATTGATTTGCAAAGTGGGATTCTTCACGCAGAGGAGAAGGATTATAAAACTGCATATAGTTATTTCTTTGAAGCTTTTGAGTCCTTCAATTCACTTGAAGACCCCAAGGCTGTTTTTAGCCTTAAATACATGTTGTTGTGCAAGATTATGGTGAGTCAGGCTGATGATGTGGCGAGCATTATATCTTCTAAGGCAGGCCTCCAATACGTTGGTCCTGACTTGGATGCCATGAAAGCTGTTGCAGACGCTCATTCTAAACGTTCCCTTAAGTTGTTTGAAATTGCTCTGCGGGACTACAAGGCACAATTGGAGGAAGACCCAATTGTCCACAGGCACCTGTCATCCCTTTATGATACCCTTCTGGAGCAGAACCTTTGCAGATTAATCGAGCCATTCTCAAGGGTCGAGATAGCGCATCTTGCTGAGCTAATTGAACTTCCCATTGATAATGTGGAGCGGAAGCTGTCCCAGATGATTTTGGACAAGAAGTTTGCTGGGACATTGGATCAAGGTGCTGGATGCCTCGTCATATTTGATGATCCCAAGAGTGACGCCATATATCCTGCAACCTTGGAAACTATTTCCAACATAGGGAAGGTTGTGGACAGCCTTTATGTTAGGTCGGCCAAAATCATGGCATAG 1908 0.4827 MATTSVLLCTGLAAVISSTYSMKKPLNDAVYGAHGEFMVALKYVTLLGLFIFSFFCHSLSIRFINQVNILVNAPLDATSLVTASYIHLILERGVTLNTVGNRIFYAALPLLLWIFGPLLVFLCTLTMIPVLYNLDFLFSASTNNTKTDHANQNALSVRCVLNLSPNFRSCLISFDVHDSHTALGPACVHSPWSTLLQSCRPPQSLEKFVEAVKMSSSYLPATTETLAQALEAKTPSEGISILYRVLENPSASPEALRIKEQAITNLSDLLRQENRAEDLRSLLNHLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMENKDYAEALTLLTGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNSLEDPKAVFSLKYMLLCKIMVSQADDVASIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFEIALRDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHLAELIELPIDNVERKLSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETISNIGKVVDSLYVRSAKIMA 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2106 635 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 227 341 IPR040773 -
Acco10g2106 635 FunFam 26S proteasome non-ATPase regulatory subunit 11 259 634 - -
Acco10g2106 635 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 533 616 IPR000717 -
Acco10g2106 635 SUPERFAMILY TPR-like 342 536 IPR011990 GO:0005515
Acco10g2106 635 Coils Coil 259 279 - -
Acco10g2106 635 Coils Coil 339 359 - -
Acco10g2106 635 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 248 631 - -
Acco10g2106 635 Pfam PCI domain 498 599 IPR000717 -
Acco10g2106 635 ProSiteProfiles PCI domain profile. 436 604 IPR000717 -
Acco10g2106 635 Pfam 26S proteasome subunit RPN6 C-terminal helix domain 606 631 IPR040780 -
Acco10g2106 635 Pfam Protein of unknown function, DUF599 1 137 IPR006747 -
Acco10g2106 635 SMART PCI/PINT associated module 356 532 - -
Acco10g2106 635 SUPERFAMILY "Winged helix" DNA-binding domain 527 609 IPR036390 -
Acco10g2106 635 Gene3D - 259 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2106 Acco-ChrAcco10 33301781 33305908 Transposed