Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2097 ATGAAGAATTATAAGGATCAATCAGAGAAGCATGAGAAAAAGAGTGCGAATGGAATAGTGGCTGTGGGAATAGACAAAGACCACAAGGGCAGTCAAAATGCACTCAAATGGGCAACTGAACATCTCCTCGCGAGAGGCTCAACCCTAGTTCTCATCCATGTCGTTGTTAAGGGAACGTCTCATGGTTCATGGTCACTGGCAAATAGTATTGTGGACAAGGGTTCATCACCACACAAAGACTCTGATGGTTGCACCGACGAAATTTTTCACCCATGTCATGTCTTTTGTGCACGGAAAGGCATACAATGCAAGGATGTCATACTAGAAGATACAGATGTAGCGAGGGCTTTGATTGAATATGCTTTTCGCACAGCTATTGAGCATTTAGTTCTTGGCGCTTCAAATAAAACTGGCTTCTTGAGAAGATTCAAGATAGCTGATATTCCAGGAATGGTGGCAAAAGGGGCACCAGATTTCTGTTCTGTCTATGTTGTTGCTAAAGAAAAGATTCAAACAATGCGATCAGCTTCTCGTCCTGCTCCAGCCATGTCCCCTTCCAGCAAGCATATTCAAGCAAACACCAAGCCAAAACTATCAGAGACAAATATGCCTTTAAATAATCATGCACATGAAAAACGATTCACTGGTGCACAAAGTACATTAAAGGATGAAAGTGAATCCTTCAGGTCACCATCAACCAGGAGAAATTTGAAGGGCAATTCTCATGGGGAAAATACCTTTTCAGGGATGTCCAACCATGGGGTATCATTTAGCTCAGAGGTAGATGGGAAAGATAGCTTTGGATCGTTACAGTATCGAAAGGGGTCTATGGATATTAGCTCTCCTCTAGAATCCTTCTCATCAGATAGTGATGGACTTTTAACATCACATTCCACGGATGATGGTGTAGAGGTTGAAATAAGGAGACTAAAATTGGAGCTTAAGAGAACAATGGAAATGTATAGCGCTGCCTGTAAAGAAGCGTTCCTAGCCCAGCAGAAGACATTGGAACTCCAACAATGGAAAAGGGGGGAAGAAAGGAGATTGGAAGAGGCAAGGCTGTCTGAGGAAGCTGCACTTACGGTTGCGGAAAAGGAGATGGCTAGAAGAAAAGCAGCCAAGGAGGCTGCTGAAGCACGAAAGAGGATTGCAGAACTGAAAACACAAAAGAGAGTTGCTGCACAAGTGGAAGCACTAAAGAAATCAGAAGAGAATACAGAAGCACTCGGTGCTTTAACAAACACAGGCATCAGTTATAGAAAGTATTCAATCGAGGAGATTGAAGCTGCGACAGAGTACTTTTCGAATTCATTAAAGATTGGAGAAGGGGGTTATGGCCCAGTATATAGGTGCCATCTAGACGGTACACCTGTGGCAGTGAAGGCTCTACGTCCTGATGCAGCACAAGGGAGGTCACAGTTTCAACGAGAGGTTGAGGTACTGAGCGTCATAAGGCATCCAAACATGGTTCTTCTCCTGGGAGCATGTCCAGAATATGGCTGCCTTGTCTATGAGTACATGACCAACGGAAGCTTAGAAGATCGCCTCTTTTGTCGCGGAGACACTCCTCCTCTTCCTTGGCAGCTCAGGTTCAAAATTGCAGCCGGAGTAGTCACTGGCTGCTTGTTTCTGCACCAGAGAAAACCAGAGCCTCTGGTGCACAGGGACTTGAAACCAGCTAACATCCTGCTTGATAGCAACTACATCGCCAAGATCAGTGATGTAGGCTTAGCCAGGCTAGTTCCACCATCTTCGATCGAGAGTTTCACACAATATCAAATGACATCCGCTGCTGGAACTTTCTGCTATATAGATCCAGAGTACCAACAGACAGGATTGGTCGGGGTGAAATCTGATGTATACTCCCTTGGGATTATTTTTCTGCAGATTTTAACAGCTCGGCCACCCATGGGTTTGACCCATCAGGTTGAGAGAGCCATTGAGAAAGGAACATTTGCTCAGATACTGGATCCAACAGTTCCTGATTGGCCCGTAGAGGAGGCCTTGAGCCTGGCAACTTTGGCACTCAAGTGTTCCCAGTTAAGGCGAAAAGATCGACCTGACCTCGCCAAGGTTGTCTTGCCTGAACTGAAAAGATTGAAAAATCTCGCTTAA 2115 0.4506 MKNYKDQSEKHEKKSANGIVAVGIDKDHKGSQNALKWATEHLLARGSTLVLIHVVVKGTSHGSWSLANSIVDKGSSPHKDSDGCTDEIFHPCHVFCARKGIQCKDVILEDTDVARALIEYAFRTAIEHLVLGASNKTGFLRRFKIADIPGMVAKGAPDFCSVYVVAKEKIQTMRSASRPAPAMSPSSKHIQANTKPKLSETNMPLNNHAHEKRFTGAQSTLKDESESFRSPSTRRNLKGNSHGENTFSGMSNHGVSFSSEVDGKDSFGSLQYRKGSMDISSPLESFSSDSDGLLTSHSTDDGVEVEIRRLKLELKRTMEMYSAACKEAFLAQQKTLELQQWKRGEERRLEEARLSEEAALTVAEKEMARRKAAKEAAEARKRIAELKTQKRVAAQVEALKKSEENTEALGALTNTGISYRKYSIEEIEAATEYFSNSLKIGEGGYGPVYRCHLDGTPVAVKALRPDAAQGRSQFQREVEVLSVIRHPNMVLLLGACPEYGCLVYEYMTNGSLEDRLFCRGDTPPLPWQLRFKIAAGVVTGCLFLHQRKPEPLVHRDLKPANILLDSNYIAKISDVGLARLVPPSSIESFTQYQMTSAAGTFCYIDPEYQQTGLVGVKSDVYSLGIIFLQILTARPPMGLTHQVERAIEKGTFAQILDPTVPDWPVEEALSLATLALKCSQLRRKDRPDLAKVVLPELKRLKNLA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2097 704 Pfam Universal stress protein family 20 148 IPR006016 -
Acco10g2097 704 Gene3D Phosphorylase Kinase; domain 1 404 506 - -
Acco10g2097 704 SUPERFAMILY Protein kinase-like (PK-like) 414 693 IPR011009 -
Acco10g2097 704 Coils Coil 360 396 - -
Acco10g2097 704 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 408 506 - -
Acco10g2097 704 PANTHER OS02G0152300 PROTEIN 20 703 - -
Acco10g2097 704 MobiDBLite consensus disorder prediction 177 205 - -
Acco10g2097 704 MobiDBLite consensus disorder prediction 176 255 - -
Acco10g2097 704 SMART serkin_6 434 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2097 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Acco10g2097 704 ProSiteProfiles Protein kinase domain profile. 434 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2097 704 CDD STKc_IRAK 440 700 - -
Acco10g2097 704 Pfam Protein kinase domain 437 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g2097 704 CDD STK_N 19 167 - -
Acco10g2097 704 MobiDBLite consensus disorder prediction 220 255 - -
Acco10g2097 704 Gene3D Transferase(Phosphotransferase) domain 1 507 703 - -
Acco10g2097 704 Gene3D HUPs 2 165 IPR014729 -
Acco10g2097 704 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2097 Acco-ChrAcco10 33237603 33241104 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2097 12 704 Receptor kinase-like Gene Family AT1G78940 51.786 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Acco10g2097 Pkinase 1.5e-39 CL0016