Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2096 ATGTTTTGTTCATCTCTTAAACTGTTTTCCATCTATAGTGAACAGAAACAAGAGCGTTCCCAGTCAAAGGCAACAATATACCCGGAAGAACAAACCAGGATTGATGATGATGATAACTATGGAGTCAAACGAAAAATTCCTTCACCTGTAAAGCATATGATATTCACAGAAAAACATGTACAGAGGAAGAAGAAGATGATGATGATTTTTTATCCTGAAAGTGACGCATATTTGCGGTGGAACCGACTTTTCCTCCGTTCTTGCTTACTAGCCCTCTTTATTGATCCTATGTATTTCTACGTGCCCATATCTGAAAATGATGGACTCTCATCATGTATGACTACCGATTCGACTTTGGCAATTGTTCTGACGTTTTTCCGTACATTATCTGATATTTTCTATCTGCTCAAAATGCTCATCAAGTTCAGAACAGCTTATGTACACCCAAATTCAAGGGTTTTTGGCAGAGGTGAGCTAGTTACGGATCCATGGTTGATTGCCAAGAGGTATTTGAAATCAGAATTCATCATAGATATTGCAGCCGCACTGCCCCTTCCTCAGATCCTGATTCGGCGTATTACAAGCTCCCATGGAGATCAGCCCAGCTATACTCTTATACTGATCATTCTGCTTCAATATTTTCCCAGATTATATTTGATTCTCCCATTAAGGTCTCAGATTGTCAAAGCGGCTGGGATTGCTACAAAGGCAGCTTGGGCAGGAGCTGCTTATAATCTTTTAGTTTACATGTTGATTAGCCATGTGTTGGGAGCATTATGGTATTTGTTTTCGTTTGAAAGGATTGTTACTTGTTGGAACTCTGCATGCCAAAGTGAAAGTCAATGTGCTCTTAAGTACTTGAATTGCAGAACTTCAAACGATGATGATCGCATAAAGTGGGTCAACTCTACTTCTGTGTTTAGCTACTGCAATCCATCAAACAACAACGGTTTTGATTTCGGCATTTATGTACCAGGAGTTAACTATAACGTTAGTTCCATACAGTTTGTTCCTAGGTATTCATATTGTTTCTGGTGGGGCTTGCAGAACATGAGCTGCTATGGCCAAAATTTGGTGGCAACCACGTTCGTTTTGGAAACTACATTTTCAATACTCGTATGTACCCTTGGTTTAGTATTGTTTGCCTACTTGATTGGAAACGTGCAGAACTATTTGCAATCCATTGCTGTGAAATTTGACAAATTGAGACTCCAACGATATGACACTGAAGAATGGATGGAACATCGCCAACTTCCACAACAACTGAGAGAACGTGTTCGAAGATTTTTTCAATACAAGTGGCTTGCAACTCAAGGAACCGAAGAGGAATTTATTTTGCGTGGCCTTCCTAAAGACCTACGGAGAGATATTCAATGCCACCTTCGCTTAGATCTTCTTCGACCTGTCCCGTTTTTCTCACAAATGGATGATCAGCTACTGGAAGTAATATGTGAGAGATCGGTATTGTTCTTGAGTCCACAAGGCAGTTATGTTGTCCGAGAAGGAGATCCAGTCACAGAGATTCTTTTCATAATAAGAGGAAAACTTGAAAGCTCAACCACAAATGGAGGAAGGATAGGTTTCTTCAACTCTAGTGTGATGAAACCAGGTGATTTCTGTGGAGGAGAGTTACTATCATGGGCATTGCTTCCAACAACAACCACTCTCAATTTGCCGCCTTCTACAAGAACAGTGAAAACCCTTGTGCAAGTAGAGGCCTTTGCACTGAAAGCTGAAGATCTCAAGTTTGTGGCGAATCAGTTTCGTCGTTTTCACAGCAAGAAGCTTCAGCATACCTTCCGATTCTACTCGCACCATTGGAGGACATGGGCAGCCTGCCTCATTCAGGCTTATTGGAGAAGGTACAAGGACAGAATGGTGGCAATGAGTTTGGGGGAAGATCAATCATTTGATTTTGATGAAATGGGACATAGCCAACAAGTTCTTAGTTCTGTGACTTCAAGGGATAGTTCACTGAGTGAACCTATAGCCATATCAAGAAGGGGACCTCTGAGGATGATGGATACTGAGATGCCTAGGTTACAAAAGCCTGAAGAACCAGACTTCTCAAAGGATGCAGAGGACATTTTGTTCACAACTAAATGA 2106 0.4112 MFCSSLKLFSIYSEQKQERSQSKATIYPEEQTRIDDDDNYGVKRKIPSPVKHMIFTEKHVQRKKKMMMIFYPESDAYLRWNRLFLRSCLLALFIDPMYFYVPISENDGLSSCMTTDSTLAIVLTFFRTLSDIFYLLKMLIKFRTAYVHPNSRVFGRGELVTDPWLIAKRYLKSEFIIDIAAALPLPQILIRRITSSHGDQPSYTLILIILLQYFPRLYLILPLRSQIVKAAGIATKAAWAGAAYNLLVYMLISHVLGALWYLFSFERIVTCWNSACQSESQCALKYLNCRTSNDDDRIKWVNSTSVFSYCNPSNNNGFDFGIYVPGVNYNVSSIQFVPRYSYCFWWGLQNMSCYGQNLVATTFVLETTFSILVCTLGLVLFAYLIGNVQNYLQSIAVKFDKLRLQRYDTEEWMEHRQLPQQLRERVRRFFQYKWLATQGTEEEFILRGLPKDLRRDIQCHLRLDLLRPVPFFSQMDDQLLEVICERSVLFLSPQGSYVVREGDPVTEILFIIRGKLESSTTNGGRIGFFNSSVMKPGDFCGGELLSWALLPTTTTLNLPPSTRTVKTLVQVEAFALKAEDLKFVANQFRRFHSKKLQHTFRFYSHHWRTWAACLIQAYWRRYKDRMVAMSLGEDQSFDFDEMGHSQQVLSSVTSRDSSLSEPIAISRRGPLRMMDTEMPRLQKPEEPDFSKDAEDILFTTK 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2096 701 Gene3D Jelly Rolls 469 590 IPR014710 -
Acco10g2096 701 ProSiteProfiles cAMP/cGMP binding motif profile. 471 541 IPR000595 -
Acco10g2096 701 MobiDBLite consensus disorder prediction 679 701 - -
Acco10g2096 701 Pfam Ion transport protein 80 397 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco10g2096 701 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 689 - -
Acco10g2096 701 Gene3D - 73 397 - -
Acco10g2096 701 SMART cnmp_10 471 603 IPR000595 -
Acco10g2096 701 Gene3D Helix hairpin bin 403 461 - -
Acco10g2096 701 ProSiteProfiles Adenosine to inosine editase domain profile. 74 178 IPR002466 GO:0003723|GO:0004000|GO:0006396
Acco10g2096 701 MobiDBLite consensus disorder prediction 679 695 - -
Acco10g2096 701 SUPERFAMILY cAMP-binding domain-like 402 595 IPR018490 -
Acco10g2096 701 CDD CAP_ED 471 603 IPR000595 -
Acco10g2096 701 SUPERFAMILY Voltage-gated potassium channels 74 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2096 Acco-ChrAcco10 33233750 33236808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2096 45 692 Ion Channels AT2G24610 57.794 0.0 783