Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2094 ATGATATTCACAGAAAAACATGAACAGAGGAGGAAGAAGAAGATGATGATTTTTGATCCTGAAAGTGACGCATATTTCCGGTGGAACCGACTTTTCCTCCGTTCTTGCTTACTAGCCCTCTTTATTGATCCTCTGTTTTTCTACGTGCCCATATCTGAAAATGATGGAATCTCAATATGTATGACTACCGATTCGAATTTGGCAATTGTTCTGACGTTTCTCAGTACATTAACTGATATTTTCTATCTGCTCAACGTGCTCATCAAGTTCAGGACAGCTTATGTACACCCAAATTCAAGGGTTTTTGGCAGAGGTGAGCTAGTTAAGGATCAATGGTTGATTGCCAAGAGGTATTTGAGATCAGAATTCATCATAGATACTGGAGCCTCACTGCCCCTTCCTCAGATCCTGATTTGGCGTATCAGAAGCTCCCATGGAGATCATCCCAGCTACGCTCTTATACTGATCACTCTGCTTCAATATTTTCCCAGATTATATTTGATTTTCCCATTAAGGTCTAAGATTGTCAAAGTGGCTGGGATTGCTACAAAGACAGCTTGGGCTGGAGCTGCTTATAATCTTTTACTTTACATGTTGGTTAGCCATGTGTTGGGAGCATTATGGTATTTGTTTTCGTTCGAAAGGAATTTTACTTGTTGGAAATCTGGATGCGAAAGTGAAAGTCAATGTGCTCTTAAGTACTTCAATTGCAGAACTTCAAACGATGATGATCGCATAACGTGGGTAAACTCTACTTCTGTGTTTGGCTACTGCAATCCATCAAACAGCAGCGGTTTCAATTTCGGCATTTTTGGATATGCAGTTACCTATAACGTTAGTTCCGTACACTTTGTTCCTAAGTATGTCTATTGTTTTTGGTGGGGCTTGCAGAACATGAGCAACTATGGCCAAAATTTGATTACGACCACATTTGTTGGGGAAACTACATTTTCAATGCTTGTATCTACCCTTGGCTTATTGTTGATTGCCCACTTGATTGGAAACATGCAGAAATATTTGCAATTCATTAATTTGAAAGTTGAGGAATGGAGACTTAAGCAACAAGATACTGAAGAATGGATGGAACATCGCCAACTTCCACAACATTTGAGAGAACGTGTTCGAAGATTTCTTCAATACAAATGGCTTGCAACTCGAGGAACCGATGAGGAATCTATCTTGCGAGGTCTTCCCAAAAACCTACGTAGAGATATTCAATGTTCCCTTTGCTTAGATCTTATTCGACCGGTCCCATTTTTCTCACAAATGGATGATCATCTACTGGAAGCAATATGTGAGAGATCGGTATTGTTCTTGAGTCCTCAAGGCAGTTATGTTGTCCGAGAAGGAGATCCAGTCACAGAGATGCTTTTCATAATAAGAGGAAAACTTGAAAGCTCGACCACAAATGGAGGAAGGATAGGTTTCTTCAACTCTACTGTAATGAAACCAGGTGATTTCTGTGGAGGAGAGTTACTATCATGGGCATTGCTTCCAACAACAACCACTCTCAATTTGCCTTCTTCTACAAGAACAGTGAAAGCCCTTGAGCAAGTAGAGGCCTTTGCACTGAAAGCTGAAGATCTCAAGTTTGTGGCGAATCAGTTTCGTCGTTTTCACAGCAAGAAGCTTCAACATACCTTCCGATTCTACTCGCACCATTGGAGGACATGGGCAGCCTGCCTCATTCAGACTTCTTGGAGAAGGTACAAGGACAGAATGGTGGCAATGAGTTTGGGGAAAGATCAATCATTTGATTTTGATGAAATGGGACATAGCCAACAAGTTCTTAGTTCTGTGACTTCAAGGGATAGTTCACTAAGTGAACCTATGGCCATCTCAAGAGGAGGAGCTATGAGGATGATGGATATTGAGATGCCTAAGTTACAAAAGCCTGAAGAGCCAGAGTTCTCAAAAGATTCATAG 1926 0.4097 MIFTEKHEQRRKKKMMIFDPESDAYFRWNRLFLRSCLLALFIDPLFFYVPISENDGISICMTTDSNLAIVLTFLSTLTDIFYLLNVLIKFRTAYVHPNSRVFGRGELVKDQWLIAKRYLRSEFIIDTGASLPLPQILIWRIRSSHGDHPSYALILITLLQYFPRLYLIFPLRSKIVKVAGIATKTAWAGAAYNLLLYMLVSHVLGALWYLFSFERNFTCWKSGCESESQCALKYFNCRTSNDDDRITWVNSTSVFGYCNPSNSSGFNFGIFGYAVTYNVSSVHFVPKYVYCFWWGLQNMSNYGQNLITTTFVGETTFSMLVSTLGLLLIAHLIGNMQKYLQFINLKVEEWRLKQQDTEEWMEHRQLPQHLRERVRRFLQYKWLATRGTDEESILRGLPKNLRRDIQCSLCLDLIRPVPFFSQMDDHLLEAICERSVLFLSPQGSYVVREGDPVTEMLFIIRGKLESSTTNGGRIGFFNSTVMKPGDFCGGELLSWALLPTTTTLNLPSSTRTVKALEQVEAFALKAEDLKFVANQFRRFHSKKLQHTFRFYSHHWRTWAACLIQTSWRRYKDRMVAMSLGKDQSFDFDEMGHSQQVLSSVTSRDSSLSEPMAISRGGAMRMMDIEMPKLQKPEEPEFSKDS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2094 641 SUPERFAMILY cAMP-binding domain-like 348 543 IPR018490 -
Acco10g2094 641 Gene3D - 55 343 - -
Acco10g2094 641 SUPERFAMILY Voltage-gated potassium channels 20 341 - -
Acco10g2094 641 Gene3D Helix hairpin bin 344 410 - -
Acco10g2094 641 PRINTS EAG/ELK/ERG potassium channel family signature 86 95 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g2094 641 PRINTS EAG/ELK/ERG potassium channel family signature 332 341 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g2094 641 PRINTS EAG/ELK/ERG potassium channel family signature 199 209 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g2094 641 PRINTS EAG/ELK/ERG potassium channel family signature 288 305 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g2094 641 PRINTS EAG/ELK/ERG potassium channel family signature 314 325 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g2094 641 PRINTS EAG/ELK/ERG potassium channel family signature 382 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g2094 641 PRINTS EAG/ELK/ERG potassium channel family signature 75 85 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g2094 641 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 637 - -
Acco10g2094 641 SMART cnmp_10 419 551 IPR000595 -
Acco10g2094 641 Pfam Ion transport protein 27 344 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco10g2094 641 CDD CAP_ED 419 551 IPR000595 -
Acco10g2094 641 ProSiteProfiles cAMP/cGMP binding motif profile. 419 489 IPR000595 -
Acco10g2094 641 Gene3D Jelly Rolls 417 538 IPR014710 -
Acco10g2094 641 Pfam Cyclic nucleotide-binding domain 441 531 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2094 Acco-ChrAcco10 33227107 33229896 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2094 2 640 Ion Channels AT2G24610 60.299 0.0 811