Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2091 ATGGCTGTGGAGCTCATGGGGTTCCCCAAAATCGACGAGCAGAAGGCGATCCAGGAGGCTGCATCGGAAGGCCTCAAGGGTATGGAGCACCTGATCCGTCTCCTCTCTCACCAACCCAATCGCATGGACTACACAGACCTCACCGACGTCACCGTTTCAAAGTTCAAAAGGCTCATTTCCCTTCTCAACCGGACCGGTCGCGCTCGTTTCAGGCGAGCGCCCATTCCTATTTCAAAGCCTTCTTTTACCGCGCCACCGCCGCCTCCTCCTCCGCCGTCGTCCTCTGCCTCGATTTCTCAAAAGCACACATTTAGTCTATCTCCAGTGCAGTTCACCTCTCCGGCGACCGTGTCTCCCAGTCCTATTGTAAATCAGGCGCCTGTGCAGCACGCGCCTTCTAGTTTCGTTCCTCCGTCTCAGGCGCCACAGAGTCTGACTCTTGATTTTACAAAGCCTAACATCGTAAGCTCTAAGAGTAAATCCTTAGAGTTTGAGTTCTCGAAGGAAACCTTTAGCGTCTCGTCTAACTCGTCGTTTATGTCGTCCGCCATTACCGGAGACGGCAGCGTTTCGAACGGAAAGCAAGGGTCGTCTCTCTTATTGACCCCGGCGGCACCGACAATGTCCGGCGGAAAGCCACCTCTCTCCTCTGGGCCGTCCAAGAAAAGATGCCACGACCACCGTGACCGCTCTGACGACGCATCGGGCTCCGTCAAGTGTCACTGCGTTAAGAGAAGGAAAAATCGTGTGAAGAGGACAGTGAGAGTACCGGCGATAAGTTCAAAGATAGCGGATGTTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAGCCGATCAAGGGTTCACCATACCCACGAGGGTACTACAAGTGCAGCACCGTGAGAGGATGTCCGGCGAGGAAGCACGTGGAACGAGCAACCGATGATCCGACGATGCTTATGGTGACGTACGAGGGGGAGCACCGACATGTGATCGAGGGTGCGATGCAGGAGAACATGGCCGGGAATGTGGGTTTGGTGTTTGAGTCAACGTGA 1041 0.5504 MAVELMGFPKIDEQKAIQEAASEGLKGMEHLIRLLSHQPNRMDYTDLTDVTVSKFKRLISLLNRTGRARFRRAPIPISKPSFTAPPPPPPPPSSSASISQKHTFSLSPVQFTSPATVSPSPIVNQAPVQHAPSSFVPPSQAPQSLTLDFTKPNIVSSKSKSLEFEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSLLLTPAAPTMSGGKPPLSSGPSKKRCHDHRDRSDDASGSVKCHCVKRRKNRVKRTVRVPAISSKIADVPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLMVTYEGEHRHVIEGAMQENMAGNVGLVFEST 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2091 346 Gene3D WRKY domain 242 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g2091 346 SUPERFAMILY WRKY DNA-binding domain 265 325 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g2091 346 MobiDBLite consensus disorder prediction 115 140 - -
Acco10g2091 346 Pfam WRKY DNA -binding domain 269 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2091 346 MobiDBLite consensus disorder prediction 72 101 - -
Acco10g2091 346 MobiDBLite consensus disorder prediction 186 238 - -
Acco10g2091 346 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 328 IPR044810 GO:0003700
Acco10g2091 346 MobiDBLite consensus disorder prediction 79 95 - -
Acco10g2091 346 ProSiteProfiles WRKY domain profile. 262 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2091 346 SMART WRKY_cls 267 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g2091 346 Pfam Plant zinc cluster domain 221 265 IPR018872 -
Acco10g2091 346 MobiDBLite consensus disorder prediction 219 238 - -
Acco10g2091 346 FunFam WRKY transcription factor 65 251 328 - -
Acco10g2091 346 MobiDBLite consensus disorder prediction 186 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2091 Acco-ChrAcco10 33182131 33183787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2091 1 345 WRKY Transcription Factor Family AT2G24570 57.423 9.64e-115 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco10g2091 WRKY 1.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2091 10 33182131 33183787 Acco10g2091 10 33182131 33183787 ECH