Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2056 ATGTCTATGAAATCGGCGCAATCTTTATTTCGGGATCGGACACAAGAATTTCAGAGTATTGCTGAGAGGCTAAAGAAATCATTAACCTCAGGATCAGGGATAGACGGGCCTAGCAGCAGTTCGAGATCCGATGAACTACGATCCAATGTTGCAATTCAGTCAGAGTTCAATAGGAGGGCTTCCAAGATTGGTTATGGAATACACCAGACGTCTCAGAAGCTCGCTAAGCTAGCGAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCAACTATGGAAATCCAAGAGCTTACCGCAATTATTAAGCAAGATATTACTGCATTGAACTCGGCCGTTGTGGATCTTCAGCTATTGAGCAACTCAAGGAATGAGCGTGGAAATACAACTAGCGACACGACTAGTCATTCAACCACAGTTGTGGACGACCTTAAAAATCGATTGATGGGTGCCACGAAAGAGTTTAAAGAAGTCCTAACCATGCGAACTGAAAACTTGAAAGTATATGAGAACAGAAGACAGTTGTTTTCTTCCACTGCTTCAAAGGATTCTGACAACCCATTTGTCCGCCAACGTCCATTAGCTTCGAGAATGGCTGTTAGTGCTTCTAATGCCCCTGCCCCGCCATGGGCTAGTGGGCCATCATCTTCAGCGCAGTTGGTTTTTGATCACCACAAGCAGGAGGATAGGGACTGTCAACCCTTGCTACAGAAACAGAAACAGCAGTTAGTTCCATTGCAAGATAGCTATATGCAAAGTAGAGCTGAAGCTCTCCAGAATGTCGAGTCCACTATTCATGAGCTAAGCAACATTTTCAACCAATTGGCAACACTTGTTTCCCAACAAGGAGAGATTGCTGTCAGGATTGACGAGAACATGGATGATACATTGGCAAACGTAGAGGGAGCACAAGGGGCTTTATTAAAGTATCTGAACAGCATATCTTCTAATAGGTGGTTGATGATCAAGATATTTTTTGTACTAATATGTTTCCTCATTGTATTCCTATTTTTTGTGGCATAG 1020 0.4314 MSMKSAQSLFRDRTQEFQSIAERLKKSLTSGSGIDGPSSSSRSDELRSNVAIQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTAIIKQDITALNSAVVDLQLLSNSRNERGNTTSDTTSHSTTVVDDLKNRLMGATKEFKEVLTMRTENLKVYENRRQLFSSTASKDSDNPFVRQRPLASRMAVSASNAPAPPWASGPSSSAQLVFDHHKQEDRDCQPLLQKQKQQLVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAVRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLICFLIVFLFFVA 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2056 339 SMART tSNARE_6 242 309 IPR000727 -
Acco10g2056 339 PANTHER SYNTAXIN 53 334 IPR045242 -
Acco10g2056 339 Gene3D - 49 302 - -
Acco10g2056 339 CDD SNARE_syntaxin5 250 334 - -
Acco10g2056 339 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 247 309 IPR000727 -
Acco10g2056 339 Pfam SNARE domain 287 335 IPR000727 -
Acco10g2056 339 MobiDBLite consensus disorder prediction 28 47 - -
Acco10g2056 339 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 11 26 IPR021538 -
Acco10g2056 339 SUPERFAMILY t-snare proteins 54 302 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2056 Acco-ChrAcco10 32950258 32953268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2056 1 339 SNARE and Associated Proteins AT3G24350 61.096 7.86e-139 396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2056 10 32950258 32953268 Acco10g2056 10 32950258 32953268 ECH