Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2048 ATGGGGGTAGATTACTACAGTATATTGAAGGTTGATAAAAATGCTACAGACGATGATCTGAAGAAGTCATATAGAAAGTTGGCCATGAAATGGCATCCGGACAAGAATCCCAACAACAAGAAAGAAGCTGAAGCCAAATTCAAGCAGATCTCAGAAGCCTATGAGGTACTAAGCGACCCTCAGAAGAGGATGGTTTATGACCAGCACGGAGAGGAAGGGTTGAAAGATATTCCCCCACCAGGGAATGGACCAGCAAGTGGGTTTAATCCCAGAAACGCTGAGGATATTTTTGCAGAATTCTTTGGGAGTAGCCCTTTTGGATTTGGATCCATGAGGTACCAATCGGAAGGACCTGGAATATACGGTGGTTTTGGTGGAGGTGACAACACGTTTCGTACATACAATGAAGGTAAACAAATGCCCAAAAAGCCACCAGCTGTAGAAAGCAAATTGCCTTGCGGCCTGGAGGAGTTATACTCTGGATCCACAAGGAAAATGAAGATCTCAAGGACTATGGATGCCAATGGACGACAGGTAACCGAAACAGAGATATTAACCATTGAAGTAAAACCCGGGTGGAAGAAAGGGACCAAGATCACTTTCCCAGATAAAGGGAATCAACAACCAAATCAACTTGCAGCTGACCTTGTGTTTGTGATTGATGAAAAGCCTCATGATTTGTACACGAGAGATGGGAATGACCTGATAGTGAGCCAAAGGGTGTCACTAGCAGAGGCAATAGGAGGAACAACGGTGGATCTCACCACACTTGATGGACGGAGCCTATCAGTACCGGTGACTGACATTGTGAGCCCTAGTTATGAGCTTCTTGTTCCAAAGGAAGGAATGCCAATAGCGAAGGAGCCTGGGAATAAAGGTGATTTGAAGATCAGATTTGAGGTTAAGTTCCCAACAAGGTTGACGCTAGAGCAACAAGCAGGGCTTAAACGAGCATTCGGAGGCTGA 966 0.4524 MGVDYYSILKVDKNATDDDLKKSYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKRMVYDQHGEEGLKDIPPPGNGPASGFNPRNAEDIFAEFFGSSPFGFGSMRYQSEGPGIYGGFGGGDNTFRTYNEGKQMPKKPPAVESKLPCGLEELYSGSTRKMKISRTMDANGRQVTETEILTIEVKPGWKKGTKITFPDKGNQQPNQLAADLVFVIDEKPHDLYTRDGNDLIVSQRVSLAEAIGGTTVDLTTLDGRSLSVPVTDIVSPSYELLVPKEGMPIAKEPGNKGDLKIRFEVKFPTRLTLEQQAGLKRAFGG 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2048 321 FunFam DnaJ subfamily B member 13 3 111 - -
Acco10g2048 321 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Acco10g2048 321 SMART dnaj_3 3 62 IPR001623 -
Acco10g2048 321 FunFam Dnaj homolog subfamily b member 142 223 - -
Acco10g2048 321 PRINTS DnaJ domain signature 62 81 IPR001623 -
Acco10g2048 321 PRINTS DnaJ domain signature 6 24 IPR001623 -
Acco10g2048 321 PRINTS DnaJ domain signature 42 62 IPR001623 -
Acco10g2048 321 PRINTS DnaJ domain signature 24 39 IPR001623 -
Acco10g2048 321 CDD DnaJ 4 59 IPR001623 -
Acco10g2048 321 SUPERFAMILY HSP40/DnaJ peptide-binding domain 228 312 IPR008971 GO:0006457|GO:0051082
Acco10g2048 321 Pfam DnaJ C terminal domain 147 304 IPR002939 -
Acco10g2048 321 SUPERFAMILY Chaperone J-domain 3 111 IPR036869 -
Acco10g2048 321 FunFam DNAJ heat shock family protein 224 319 - -
Acco10g2048 321 SUPERFAMILY HSP40/DnaJ peptide-binding domain 148 226 IPR008971 GO:0006457|GO:0051082
Acco10g2048 321 Gene3D - 225 305 - -
Acco10g2048 321 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 318 - -
Acco10g2048 321 CDD DnaJ_C 147 307 - -
Acco10g2048 321 Gene3D - 145 223 - -
Acco10g2048 321 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Acco10g2048 321 Gene3D DnaJ domain 3 112 IPR036869 -
Acco10g2048 321 Pfam DnaJ domain 4 67 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2048 Acco-ChrAcco10 32900512 32902318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2048 5 69 C2H2 Transcription Factor Family AT1G74250 42.029 3.55e-11 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g2048 10 32900512 32902318 Acco10g2048 10 32900512 32902318 ECH