Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2039 ATGGCTCACCATAACAATGGCAGCAACAGTTCGAGCCAACAGTTAGTGAAGACCGTCTTCCATGATTTTATGGGCGCGAAGCCCAATGATGCCCTTGTCGTTTTGCCCCCCAAAACCGCCACCGTGAGGCTGTCCGAGGCCTCGCCGTCCTCCGCATCGGTGTCCGTTGCCGCCTCTTCTGGCGGTGGCCGTGGTCCCTTCTCAACCACTTCCGACATCGGCTCTGAAAGACAGGTAGGAAATCATCTCGAGGGAGTTCCATTTTATGGACATAGGAGTGATTTTTCTGACACTGGGCTAAGCAACAGACTAATAGGAAACAAGAGAGGTAGTTCTGAGTCCGCTTTCGTGGGATCCTCCAGAGATGCCTTCCAAATGGTCCCTGACTCCATTCAAAACTCACATTTGATTAAAATGTTCCGGAGTACAGCGGGAGGAGATCATCATAGAAGATCTAATGATGATGAAGTTTTTCCTGGCATGCAGTCACTGAAGCCAACTTCAGCTTCTCAGATGTTTCAGCCTCTTACTGGAACTAAGTTTGATGCCAATAGATGGGAACGGTCTGTCGTTATGAATGCTGGCCCTTCAATGCAGCATCCACCACGTGGGGCTCAATTAACACCTTTTGTGCACCAGATAGCTTCAAACAAGGTCAGGGACACCAACATTGGTCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGCCCTGGAATTTTGAGCTCTATAAACATCACAACTTCTGCCACTGAGAAAACTCCAGCTGCAGTGGTGCTTGGTGGAGGCGGGCCAAAGCCTATGATGAATGTAATAGATTTAGAATCATCCACTCCTCAGAGCCAACATGAATCGAGATCTGCCAGCTGCCAGATGACCATATTCTATGGAGGTCAAGCTCACGTGTTTGATAATGTCCACCCTAATAAGGCAGATGTTATAATGAGCTTAGCAGGGTCCAATGGAGGAAGTTGGACCACAAGCACTTCCTCGCCCAAGCCTCCATTGAAACATCTGTTTCATGATTCTGTAGAAACTCAAACTGGAAAGCTTCATGCCACCCCACCATCACCACTAGGGCGACCTCAAGCAGGTGTTGCTGCTAAAGAAGATGGTAGAAGAAACCCAGTTGAAGTAGCCGAGCTAGATCCCATTTCTCAAGAGAAGAGAGGCCAATGA 1200 0.4825 MAHHNNGSNSSSQQLVKTVFHDFMGAKPNDALVVLPPKTATVRLSEASPSSASVSVAASSGGGRGPFSTTSDIGSERQVGNHLEGVPFYGHRSDFSDTGLSNRLIGNKRGSSESAFVGSSRDAFQMVPDSIQNSHLIKMFRSTAGGDHHRRSNDDEVFPGMQSLKPTSASQMFQPLTGTKFDANRWERSVVMNAGPSMQHPPRGAQLTPFVHQIASNKVRDTNIGPSFISQSAADEGSRTGMKGPGILSSINITTSATEKTPAAVVLGGGGPKPMMNVIDLESSTPQSQHESRSASCQMTIFYGGQAHVFDNVHPNKADVIMSLAGSNGGSWTTSTSSPKPPLKHLFHDSVETQTGKLHATPPSPLGRPQAGVAAKEDGRRNPVEVAELDPISQEKRGQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2039 399 SMART tify_2 292 327 IPR010399 -
Acco10g2039 399 MobiDBLite consensus disorder prediction 43 75 - -
Acco10g2039 399 MobiDBLite consensus disorder prediction 354 399 - -
Acco10g2039 399 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 150 359 IPR040390 -
Acco10g2039 399 MobiDBLite consensus disorder prediction 374 399 - -
Acco10g2039 399 Pfam tify domain 295 326 IPR010399 -
Acco10g2039 399 ProSiteProfiles Tify domain profile. 292 327 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2039 Acco-ChrAcco10 32852021 32856154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2039 1 325 Tify Gene Family AT4G32570 38.304 7.19e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco10g2039 tify 1.6e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2302 05 38964406 38968682 Acco10g2039 10 32852021 32856154 CCT