Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2026 ATGCTCGTTGGTCCTGTGAGAGTATTGCTCATGGATGAAATATCATCTGGTTTGGACAGTTCAACAACTTTTCAAATAATAAATTCAATCCGACAATCCATCCACATTCTCAATGGAACTGCACTTATCTCTCTCCTACAACCTGCACCAGAAACTTATGAGCTATTTGATGATATCTTACTTCTCACAGATGGCCAAATTGTGTACCAAGGACCCAAAGAAAACGTTCTTGAGTTCTTTGAATCCATGGGCTTCAAGTGTCCTGAAAGAAAAGGAGTTGCTGACTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAGTACTGGGCATGTGAAGATGCGCCTTATAGTTTTGTTACTGTGAAGGACTTTGTTGAAGGCTTCCAATCATTTCATATAGGGCAAGAACTTAAAGATGAGTTGGCCGATCCTTTTGAGAAAACTAAATGTCATCCAGCTGCCTTGACCACCAAGAAATATGGTGTTAGCAAGAAAGAGTTGTTGAGAGCTTGTTTTAGCAGAGAATTTTTGCTTATGAAGAGAAATTCCTTTGTTTACATATTCAAAGCCACCCAACTTACTTATTTAGCTATCATGACAACAACATTATTTCTACGAACAAACATGCATCGAGACACCGTGTCGGACGGAGGAACTTATATGGGTGCTCTGTTCTTTGCTGTCATTGTAGCTATGTTCAATGGAATATCAGAGTTAAACATGACCATAATGAAACTTCCTATCTTTTACAAGCAAAGAGACTCTTTATTTTATCCTTCATGGGCTTATTCTCTACCACCATGGATACTCAAAATACCAATAACCCTTGTAGAAGTAGCCATTTGGGAAGGCATCACTTATTATGGCATTGGTTTTGATCCAAATATTGGGAGGCTCTTCAAACAATACCTCCTTATTTTATGCATTAATCAGATGGCTTCTGCGCTATTTCGGTTAATGGCAGCATTAGGAAGGGATGTAATTGTTGCAAATACTGTTGGATCATTTTCTTTACTTATAGTTATGGTTTTGGGAGGATTTGTGATTTCCCGAGATAATATACACAAATGGCTCTTATGGGGTTATTGGTCCTCACCATTGATGTACGGGCAAAATGCTATTGCTGTAAACGAATTTCTCGGCCATAGCTGGAGAAAGGTTGCTCCTAATTCCAAGGAGGCATTGGGAATTATGGTGTTGAAATCTCGTGGGTTTTTCCCAGCAGCATATTGGTATTGGATTGGAGTTGGAGCTTTGATTGGTTATATCTTTCTTTTTAATTTCCTTCTCACCTTGGCTTTGCAATGTCTCAAACCAGCAGCATTTAAAAGGGTTCAACCAGGGCTTTCAAAAGAGAAACTGCTCGAGCGAAATGCTTCAAAAACTGGAGAGTTCATCGACCATCCACTAGCAACATTGAATACTTTTGACGACAGTTCAAAAACAGAAGTCAAAGAAGCAGACTTATCATCCAGATCACTTCATGGACCTAGTAGCCACAAGGGCATGGTGCTTCCTTTTCAACCCTTATCCCTGACCTTTGATGAGATCAGATATTCTGTTGACATGCCACAGGAAATGAAAAACCAAGGTGTTATTGAGGATCGTCTTGAACTTTTAAGGGGTGTGAGTGGTGCTTTTAGGCCTGGAATTCTAACAGCTTTAATGGGAGTAAGTGGAGCAGGCAAGACTACTTTAATGGATGTTTTGGCTGGAAGGAAAACTAGTGGTTATATTGAAGGAAGCATAACAATTTCTGGGTATCCTAAAAAGCAAGAAACTTTTGCTCGTATATCAGGGTACTGTGAACAATTTGATATACACTCACCTTATGTTACAGTCTATGAGTCTCTATTGTTCTCTGCATGGCTTCGTTTGTCCCCTGAAATTGATGATGCAACTAAAAAGATGTTCATAGAGGAAATCTTGGAGCTTGTGGAGCTTAACTCATTAAGGGAAGCATTAGTTGGGTTACCAGGTGAGACAGGACTTTCGATTGAACAGCGCAAAAGGCTTACAGTTGCAGTCGAACTTGTAGCCAACCCATCAATAATATTCATGGATGAGCCAACCTCAGGTCTTGATGCCAGAGCAGCTGCAATTGTTATGAGGACTGTGAGGAACACAGTGGACACAGGACGAACCGTAGTTTGCACCATTCACCAGCCAAGCATTGATATATTTGATGCCTTTGACGAGGCTATTCAAGGAGTTCCTAAGATCAAAGATGGTTATAATCCAGCAACTTGGATGCTTGAAGTGACATCACAAGGGATAGAATCAAGCCTCAATGTTAACTTCACTACTGTATACAGAAACTCAGAACTCCACCGGAGAAATAAACAACTGATCCAAGAGCTTAGTACACCTAGTCAAGATTCAAAAGATATCTGCTTTGCAAGTCAATATTCACAGTCTTTCCTTGCACAATGCATAACTTGTCTTTGGAAACAACATTTATCATATTGGCGCAACACATCATATAGTGCAGTGAGGCTACTATTTACAACAATTATAGCTTTGCTGTTTGGGCTGATATTTTGGGATGTTGGCTCAAAAAGGAGAAGGGCACAAGATCTTTTCAATTCTATGGGTTCAATGTATGCGGCTGTTACATTCATTGGAGTACAAAATGGCTGCTCAGTACAACCTATCGTGGCCGTTGAAAGAACAGTCTTCTACAGAGAAAGGGCTGCTGGAATGTATTCAGCTTTGCCTTATGCTGTAGCACAGGCTATTGTTGAGCTTCCTCATATCTTGATCCAGACTCTAATATATGGGGTTATAGTGTATGCCATGATGGGATTTGAGTGGACATTAACCAAGTTCTTGTGGTATCTCTTCTTCATGTACTTCACCTTTTCATACTTTACATTATACGGCATGATGACCATGGCTATCTGTCCCAATCCCCATGTTGCAATGATATTCTCAAGTGCCTTCTATGCAATATGGAACCTTTTCTCTGGCTTTGTCATTCCCTTGTCGAGAATACCGATATGGTGGAAATGGTACTATTGGATTTGCCCTATTGCCTGGACTTTGAATGGATTGATTACCTCCCAGTATGGAGACCAGAAGGAGAAACTAGAGTCTGGCCAAACAGTTGAAGAATTTGTGAGGAGTTATTTCGGATTCAGATATGATTTACTGGGAATTGTAGCTATTGTGGTGGCTAGTTTCTCAATACTGTTTGCACTCATATTCGCTTTTGGCATCAAGCAATTTAACTTCCAAAAGCGATGA 3249 0.401 MLVGPVRVLLMDEISSGLDSSTTFQIINSIRQSIHILNGTALISLLQPAPETYELFDDILLLTDGQIVYQGPKENVLEFFESMGFKCPERKGVADFLQEVTSRKDQWQYWACEDAPYSFVTVKDFVEGFQSFHIGQELKDELADPFEKTKCHPAALTTKKYGVSKKELLRACFSREFLLMKRNSFVYIFKATQLTYLAIMTTTLFLRTNMHRDTVSDGGTYMGALFFAVIVAMFNGISELNMTIMKLPIFYKQRDSLFYPSWAYSLPPWILKIPITLVEVAIWEGITYYGIGFDPNIGRLFKQYLLILCINQMASALFRLMAALGRDVIVANTVGSFSLLIVMVLGGFVISRDNIHKWLLWGYWSSPLMYGQNAIAVNEFLGHSWRKVAPNSKEALGIMVLKSRGFFPAAYWYWIGVGALIGYIFLFNFLLTLALQCLKPAAFKRVQPGLSKEKLLERNASKTGEFIDHPLATLNTFDDSSKTEVKEADLSSRSLHGPSSHKGMVLPFQPLSLTFDEIRYSVDMPQEMKNQGVIEDRLELLRGVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTSGYIEGSITISGYPKKQETFARISGYCEQFDIHSPYVTVYESLLFSAWLRLSPEIDDATKKMFIEEILELVELNSLREALVGLPGETGLSIEQRKRLTVAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDEAIQGVPKIKDGYNPATWMLEVTSQGIESSLNVNFTTVYRNSELHRRNKQLIQELSTPSQDSKDICFASQYSQSFLAQCITCLWKQHLSYWRNTSYSAVRLLFTTIIALLFGLIFWDVGSKRRRAQDLFNSMGSMYAAVTFIGVQNGCSVQPIVAVERTVFYRERAAGMYSALPYAVAQAIVELPHILIQTLIYGVIVYAMMGFEWTLTKFLWYLFFMYFTFSYFTLYGMMTMAICPNPHVAMIFSSAFYAIWNLFSGFVIPLSRIPIWWKWYYWICPIAWTLNGLITSQYGDQKEKLESGQTVEEFVRSYFGFRYDLLGIVAIVVASFSILFALIFAFGIKQFNFQKR 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2026 1082 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 734 1082 - -
Acco10g2026 1082 SMART AAA_5 550 743 IPR003593 GO:0016887
Acco10g2026 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 100 IPR027417 -
Acco10g2026 1082 Gene3D - 1 115 IPR027417 -
Acco10g2026 1082 Pfam ABC-2 type transporter 47 98 IPR043926 GO:0140359
Acco10g2026 1082 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 513 769 IPR003439 GO:0005524
Acco10g2026 1082 Pfam ABC transporter 541 693 IPR003439 GO:0005524
Acco10g2026 1082 Pfam ABC-2 type transporter 168 380 IPR013525 GO:0016020|GO:0140359
Acco10g2026 1082 Pfam ABC-2 type transporter 811 1023 IPR013525 GO:0016020|GO:0140359
Acco10g2026 1082 CDD ABCG_PDR_domain2 510 734 IPR034003 -
Acco10g2026 1082 FunFam ABC transporter G family member 40 527 745 - -
Acco10g2026 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 529 726 IPR027417 -
Acco10g2026 1082 Gene3D - 527 737 IPR027417 -
Acco10g2026 1082 Pfam Plant PDR ABC transporter associated 385 441 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2026 Acco-ChrAcco10 32767416 32772689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2026 538 725 Calmodulin-binding Proteins AT2G36910 26.108 7.03e-06 48.5