Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2024 ATGGACGCGATGTCTAGCTCCGCGATGTTGGGTGAGGCGAGCTCGTGGTCCCGGGCGATGGTGAAGATCTCTCCCTACACGTTTTCCGCCATTGGAATCGCCATCTCCATCGGCGTCTCTGTTCTCGGTGCCGCCTGGGGTATTTATATTACTGGAAGTAGCTTGATCGGTGCCGCAATTAAGGCGCCCCGAATCACCTCCAAGAATCTTATAAGCGTGATCTTCTGTGAAGCTGTTGCTATTTACGGTGTTATTGTGGCAATCATTCTGCAAACAAAATTAGAGAGTGTTCCAAAGGCAAGTATTTATGCGCCTGAGTCTCTTAGAGCTGGATATGCAATTTTCGCCTCTGGAATTATTGTGGGCTTTGCAAATCTTGTTTGTGGGTTATGTGTTGGTATAATTGGAAGTAGCTGTGCATTGTCTGATGCTCAGAACTCCACACTTTTTGTGAAAATTCTTGTGATTGAGATCTTTGGTAGTGCGCTTGGGCTATTTGGAGTTATTGTGGGAATTATCATGTCAGCTCAAGCATCATGGCCCTCGAAAGTTTAA 555 0.4613 MDAMSSSAMLGEASSWSRAMVKISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKASIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPSKV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2024 184 CDD ATP-synt_Vo_c_ATP6F_rpt1 28 90 - -
Acco10g2024 184 FunFam V-type proton ATPase proteolipid subunit 26 181 - -
Acco10g2024 184 Gene3D - 26 180 IPR035921 -
Acco10g2024 184 CDD ATP-synt_Vo_c_ATP6F_rpt2 110 174 - -
Acco10g2024 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 44 68 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco10g2024 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 70 94 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco10g2024 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 126 152 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco10g2024 184 PRINTS Vacuolar ATP synthase 16kDa subunit signature 153 176 IPR000245 GO:0033179|GO:0046961|GO:1902600
Acco10g2024 184 SUPERFAMILY F1F0 ATP synthase subunit C 24 93 IPR035921 -
Acco10g2024 184 Pfam ATP synthase subunit C 31 90 IPR002379 GO:0015078|GO:0033177|GO:1902600
Acco10g2024 184 Pfam ATP synthase subunit C 115 174 IPR002379 GO:0015078|GO:0033177|GO:1902600
Acco10g2024 184 SUPERFAMILY F1F0 ATP synthase subunit C 107 175 IPR035921 -
Acco10g2024 184 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 12 178 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2024 2 183 Primary Pumps ATPases(2) AT2G25610 87.912 3.13e-108 307