Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g2009 ATGGAAGCCACTGCGGGAATGGTGGCTGGGTCTTATAAACGGAACGAGCTTGTCCGAATTCGTCACGATTCAGATAGTGGGCCCAAGCCCTTAAAGAATTTGAATGGCCAAATGTGTCAAATATGTGGTGACACTGTCGGATTAACAGCAGCCGGTGATGTTTTTGTTGCTTGCAATGAGTGTGCCTTCCCAGTTTGTCGTCCTTGTTATGAATATGAGCGAAAAGATGGGAACAAGTCTTGCCCCCAGTGCAAAACTAGGTACAAGAGGCACAAAGGGAGTCCAAGAGTGGAAGGGGATGACGATGAGGATGATGTTGATGATATAGAGGATGAGTTCAATTATGACCAAGGAAAAACCAAATCTAGGCGGCAGTGGGAGGGAGAAGATGCTGACCTCTCTTCATCCGCTAGATATGATTCTCAACAACCAATTCCACTCCTCACCAGTGGGCAGCCGATGTCTGGTGAGATTCCGACACCTGACACCCAATCTGTGCGAACTACTTCAGGTCCTTTGGGTCCATCTGAAAAGGTTCACTCACTTCCCTATATTGATCCTAGGCAACCAGTTCCAGTGAGAATTGTAGACCCTTCAAAGGACTTGAATTCTTATGGTCTGCCTAATGTTGACTGGAAGGAAAGGGTTGAAGGTTGGAAGCTCAAGCAGGAGAAGAACATGGTCCAAATGACTGGTAATAGATACAATGAAGGGAAGGGTGGAGACATTGAAGGGACAGGTTCTAATGGAGAAGAACTGCAAATGGTTGATGATGCTCGACAGCCTTTGAGTCGTGTGGTGCCTATTGCTTCTTCTCACTTGACCCCTTATCGTGTTGTTATAATACTCCGGCTTATTATTCTGGGCTTCTTCTTACAATACCGTGCGACTCATCCTGTGAAAGATGCATACCCCCTGTGGCTGACATCAGTTATCTGTGAGATTTGGTTTGCCATGTCTTGGATTCTGGATCAGTTTCCAAAATGGTCTCCCATTAATCGGGAGACTTATCTTGATAGGCTTGCTTTAAGATATGACCGTGATGGAGAACCATCTCAGTTGGCTCCTGTGGATGTTTTTGTCAGTACGGTGGACCCTCTCAAAGAGCCTCCTCTTGTGACTGCAAACACTGTTTTGTCTATCCTTGCTGTCGATTACCCCGTGGACAAGGTTTCTTGCTATGTATCAGATGATGGTTCGGCTATGTTGACTTTTGAAGCCCTTTCAGAAACTGCTGAGTTTGCGAAGAAGTGGGTGCCCTTCTGCAAAAAGCACAATATTGAGCCAAGAGCCCCTGAGTTTTATTTTGCTCAGAAGATAGACTACTTGAAGGACAAGATTCAACCTTCATTTGTGAAGGAGCGCCGAGCAATGAAGAGAGAATATGAAGAATTCAAAGTAAGGATCAATGCCTTGGTAGCCAAAGCTCAAAAAATGCCAGAAGAAGGTTGGACAATGCAGGATGGAACTCCATGGCCTGGAAATAATCCAAGGGATCATCCTGGAATGATTCAGGTGTTCTTAGGTCATAGTGGAGGCCTTGATACTGATGGAAATGAGCTACCTAGACTTGTTTACGTTTCTCGTGAGAAGCGACCAGGTTTTCAGCATCACAAGAAGGCTGGAGCTATGAATGCTTTGATTCGAGTTTCGGCTGTCTTGACCAATGGTGCATATCTATTGAACGTTGATTGTGATCACTATTTCAACAATAGCAAAGCTCTTAGGGAAGCCATGTGTTTCATGATGGATCCTGTTCTGGGAAAGAAGACTTGCTATGTACAATTCCCTCAGCGGTTTGATGGCATTGATTTGCATGATCGATATGCCAATCGCAATATTGTGTTCTTTGATATCAACATGAAAGGGCAAGATGGTGTCCAGGGCCCAGTCTATGTCGGAACTGGTTGTTGTTTCAATAGACAGGCTCTATATGGCTATGATCCTGTTTTGACTGAGGAAGATTTGCAGCCCAATATTGTTGTAAAGAGCTGCTGGGGTTCTAGAAAGAAGGGAAAGGACAAGAAGTACATTGACAAGAAGAGGGCAGCAAAAAGAACTGAATCCACCATTCCCATCTTCAATATGGAAGATATAGATGAGGGTGTTGAAGGATATGATGATGAGAGATCTCTTCTTATGTCTCAGAAGAGCTTAGAGAAGCGTTTTGGTCAGTCCCCAGTTTTCATTGCTGCCACGTTCATGGAGCAGGGCGGCATTCCTCCCTCAACTAACCCTGCGACTCTTCTCAAGGAAGCAATCCATGTCATTAGCTGTGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATCTTGACCGGGTTCAAGATGCATGCACGTGGTTGGATCTCTGTCTATTGCATGCCTCTTCGACCTGCATTCAAGGGTTCTGCTCCCATCAATCTTTCTGATCGTCTTAATCAGGTGCTTCGGTGGGCCTTGGGATCCATTGAGATTTTCCTTAGCAGGCATTGTCCCCTATGGTATGGCTACAATGGAAGATTGAAGCCTCTCATGAGGCTGGCTTATATCAACACCATTGTCTACCCCTTTACCTCAATCCCTCTGATTGCTTACTGTGTGCTCCCTGCATTTTGTCTTCTCACAAATAAATTTATTATTCCTGAGATAAGCAACTTTGCAAGCATGTGGTTTATTCTCCTCTTCGTCTCCATTTTTGCCACCTCAATTCTTGAACTCAGGTGGAGTGGGGTTGGTATCGAAGACTGGTGGAGGAATGAGCAGTTTTGGGTTATTGGTGGTACATCTGCACATCTCTTTGCCGTGTTCCAAGGGCTTCTGAAAGTGCTTGCTGGAATCGATACAAACTTCACTGTGACATCAAAGGCATCAGATGAAGATGGGGACTTTGCTGAACTTTACGTGTTCAAATGGACATCACTTCTGATACCTCCCACATCAGTCATTATAGTGAACATCATAGGGATTGTCGCTGGCGTGTCCTATGCCATTAACAGCGGATACCAATCGTGGGGTCCTCTATTTGGAAAGCTGTTCTTTGCTATATGGGTGGTTGCCCATTTATACCCATTCTTGAAGGGTCTGCTTGGAAGGCAAAACCGTACCCCAACCATTGTTATTGTGTGGTCTATCCTTCTTGCTTCCATATTCTCCCTGCTGTGGGTGAGGATCGATCCCTTCATTACTGACTCCTCGAAAGCTTCTAGCAACGGTCAATGTGGTGTCACCTGCTAG 3249 0.4515 MEATAGMVAGSYKRNELVRIRHDSDSGPKPLKNLNGQMCQICGDTVGLTAAGDVFVACNECAFPVCRPCYEYERKDGNKSCPQCKTRYKRHKGSPRVEGDDDEDDVDDIEDEFNYDQGKTKSRRQWEGEDADLSSSARYDSQQPIPLLTSGQPMSGEIPTPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLPNVDWKERVEGWKLKQEKNMVQMTGNRYNEGKGGDIEGTGSNGEELQMVDDARQPLSRVVPIASSHLTPYRVVIILRLIILGFFLQYRATHPVKDAYPLWLTSVICEIWFAMSWILDQFPKWSPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALREAMCFMMDPVLGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGYDPVLTEEDLQPNIVVKSCWGSRKKGKDKKYIDKKRAAKRTESTIPIFNMEDIDEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPLRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKPLMRLAYINTIVYPFTSIPLIAYCVLPAFCLLTNKFIIPEISNFASMWFILLFVSIFATSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTSVIIVNIIGIVAGVSYAINSGYQSWGPLFGKLFFAIWVVAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFITDSSKASSNGQCGVTC 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g2009 1082 Coils Coil 455 475 - -
Acco10g2009 1082 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Acco10g2009 1082 FunFam Cellulose synthase 21 112 - -
Acco10g2009 1082 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 261 1048 - -
Acco10g2009 1082 SUPERFAMILY Nucleotide-diphospho-sugar transferases 375 652 IPR029044 -
Acco10g2009 1082 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Acco10g2009 1082 SUPERFAMILY RING/U-box 22 111 - -
Acco10g2009 1082 FunFam Cellulose synthase 474 648 - -
Acco10g2009 1082 MobiDBLite consensus disorder prediction 113 134 - -
Acco10g2009 1082 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 515 657 IPR029044 -
Acco10g2009 1082 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
Acco10g2009 1082 MobiDBLite consensus disorder prediction 135 175 - -
Acco10g2009 1082 CDD mRING-HC-C4C4_CesA 37 87 - -
Acco10g2009 1082 MobiDBLite consensus disorder prediction 74 185 - -
Acco10g2009 1082 Pfam Cellulose synthase 357 1073 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g2009 Acco-ChrAcco10 32660781 32666593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g2009 1 1080 Glycosyltransferase AT4G32410 86.255 0.0 1911