Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1998 ATGGCGAGTTTGTTACATGGGACGCTCTGTGTAACCATATATGATGTTGATAGGCTGCCCAACAGATGTAACTTAGAATTTTGCAACAAGGATATACCTCATCGAGGGAAGAGATTTCTAGCCCAAGTCAAAGGTTGTTTGCTGTGTCGACCAGAGCTTGTTGGGACACGACTATATGCAACAGTTGATTTAGACAAAGCCAGAGTTGCTCGAACTAGAATGATCCGACATCAAACCTCCAATCCCAAGTGGAATGAGAAATTTGACATATATTGTGCCCACAAGGTGTCAAACATAGTATTCACAGTCAAAGATGGAAACCCCATTGGAGCAATACTAATCGGAAGAGCTTCTGTCCCTGTAGATCAAGTTCTGACTGGGGGCCCACTAAACAGACAAGTTGAGATTTTCGATGAAGACCTTCTTCCCATAGGTGGCACTAAAATACATGTCAAAATAGAATTCAACCATGCGGTCAACGATCCATACTGGTCTAGAGGAATAAAGACTGCTGATTTTCCTGGAGTTCCTCGTGTGTTCTTCAACCAGAGAGAAAATTGCAAAGTCACTTTGTACCAAGATGCTCATGTCCTTGATGATTTTATTAAGGTATCTATCCCACTGTCCGGGGGAATCAGATATTATAACCCAGGAAGATGTTGGGAGGATATTTTCAGTGCCATTTATAATGCTAAGTGTCTGATTTACATAACTGGCTGGTCTGTTTACACTGAAACGACCTTAATTAGGAACTCTGATAAGCCATCCATGACTCTGGGCGAGCTGCTTTTGATGAAAGCTGATGAAGGAGTAAAAGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGATGAACTCAGAAAAGAAGGATTAATGACAACTCATGATGAAGAAACAGCACAGTACTTTAGGAATACTAAAGTAAAATGTGTGTTGTGTCCCAGAGCTCCTGATGTTGGAAGGAGCATAATCCAAGGGCTTCAAACTTCAACTATGTTCACTCACCACCAAAAGGCAGTAGTAGTTGACAGTGACTTACCTGACATTAATGAAGAGTCCAAGTTAGGACCACAAAAGAGGACTATTGTGAGTTTTATAGGCGGAATTGATCTGTGTGATGGGCGATACGATACACATGAGCATCCTTTGTTTTCGACTCTGAACACGATACATAAAGACGATTTTCACCAGCCAAACTTTGCAGGAGCTTCAATTAAGAAAGGTGGGCCAAGAGAGCCATGGCATGACATACATTGCAAGCTAGAAGGGCCTATTGCTTGGGACGTCTTGTACAATTTTGAGCAGAGGTGGCAGAAGCAAGTTGGGAAGGACTTGCTTATACCATTAGAAGTCTATGATGAGATTCTTGTCTCTCCATCTGAAATAAAACCATTAGAAGACAATGAAACATGGACTGTTCAGCTGTTCAGGTCCATTGATGGTGGTGCTGTTTCTGGTTTTCCTACGACACAAGAGGAGGCAGCCGAGTGGGGCCTAGTCAGTGGGAAAAACAACATCATAGATAGAAGCATTCAGGATGCATACATAAATGCTATTAGGCGAGCCAAGAACTTCATCTACATCGAAAACCAGTATTTCCTGGGGAGCTCATATGGCTGGAAAGCAACTGATTTAAAAGTTGAAGATATTGCGGCTCTACATCTTATACCAAAGGAGCTATCTTTGAAGATTGTAAGCAAGATTAAAGCAGGAGAGAGGTTTGTTGTGTACATTGTGATCCCAATGTGGCCGGAAGGTGATCCTGAAAGTGCTTCAGTTCAAGCAATATTAGATTGGCAGAAGAGGACAATGGAGATGATGTATACTGATATAGCTGAAGCCATTGAACAAGTAGGATCTAAAGCCGATCTCAGAGATTATCTCACTTTTTTCTGCCTTGGAAATAGAGAGATAGAGAAACCTGGAGAATATATTCCTCCAGAGAGACCAGTTCCTGATACTAACTATGATAGAGCACAAAAAGCCAGGCGCTTCATGATCTATGTTCATTCAAAGATGATGATAGTTGATGATGAGTATATAATAGTTGGTTCAGCCAACATAAACCAGAGATCAATGGACGGAGGAAGAGACACAGAAATAGCAATGGGGGCATTTCAACCACATCATCTAACAGAGGAAGAGAGCAGACCAAAAGGTCAGATTCATGGATTCAGAAGGGCTTTATGGCTTGAGCATCTTGGAGATGTGGATGCTCTAGTGTTGGACCATCCAGAGACAGAAAGATGTGTGCAGCTTGTGAATTTTGCTGCTGACGTAAACTGGAAATTATACACAAAGGAAACGTTCGATGAAAATGGTTCAATTATTTTTAATCATCTCTTGCGTTACCCCATTGATATAACCAAAAGTGGGGAAGTCATTGCATTGGAAGGGTTTGAGTTCTTTCCTGACACAAAGGCTCGTATTCTGGGTACCAAATCTGGGTACCTTTCTCCTATCCTCACCACCTAG 2475 0.4174 MASLLHGTLCVTIYDVDRLPNRCNLEFCNKDIPHRGKRFLAQVKGCLLCRPELVGTRLYATVDLDKARVARTRMIRHQTSNPKWNEKFDIYCAHKVSNIVFTVKDGNPIGAILIGRASVPVDQVLTGGPLNRQVEIFDEDLLPIGGTKIHVKIEFNHAVNDPYWSRGIKTADFPGVPRVFFNQRENCKVTLYQDAHVLDDFIKVSIPLSGGIRYYNPGRCWEDIFSAIYNAKCLIYITGWSVYTETTLIRNSDKPSMTLGELLLMKADEGVKVLMLVWDDRTSDELRKEGLMTTHDEETAQYFRNTKVKCVLCPRAPDVGRSIIQGLQTSTMFTHHQKAVVVDSDLPDINEESKLGPQKRTIVSFIGGIDLCDGRYDTHEHPLFSTLNTIHKDDFHQPNFAGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWQKQVGKDLLIPLEVYDEILVSPSEIKPLEDNETWTVQLFRSIDGGAVSGFPTTQEEAAEWGLVSGKNNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKATDLKVEDIAALHLIPKELSLKIVSKIKAGERFVVYIVIPMWPEGDPESASVQAILDWQKRTMEMMYTDIAEAIEQVGSKADLRDYLTFFCLGNREIEKPGEYIPPERPVPDTNYDRAQKARRFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDTEIAMGAFQPHHLTEEESRPKGQIHGFRRALWLEHLGDVDALVLDHPETERCVQLVNFAADVNWKLYTKETFDENGSIIFNHLLRYPIDITKSGEVIALEGFEFFPDTKARILGTKSGYLSPILTT 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1998 824 Gene3D Endonuclease Chain A 212 453 - -
Acco10g1998 824 FunFam Phospholipase D delta 211 454 - -
Acco10g1998 824 Pfam Phospholipase D C terminal 742 814 IPR024632 -
Acco10g1998 824 SMART pld_4 665 692 IPR001736 GO:0003824
Acco10g1998 824 SMART pld_4 331 375 IPR001736 GO:0003824
Acco10g1998 824 SUPERFAMILY Phospholipase D/nuclease 165 448 - -
Acco10g1998 824 PIRSF PLD_plant 1 824 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco10g1998 824 SMART C2_3c 8 133 IPR000008 -
Acco10g1998 824 Pfam C2 domain 7 134 IPR000008 -
Acco10g1998 824 Gene3D Endonuclease Chain A 483 712 - -
Acco10g1998 824 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 155 IPR035892 -
Acco10g1998 824 CDD C2_plant_PLD 4 155 - -
Acco10g1998 824 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Acco10g1998 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 331 375 IPR001736 GO:0003824
Acco10g1998 824 Pfam Phospholipase D Active site motif 666 692 IPR001736 GO:0003824
Acco10g1998 824 Pfam Phospholipase D Active site motif 331 375 IPR001736 GO:0003824
Acco10g1998 824 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 665 692 IPR001736 GO:0003824
Acco10g1998 824 SUPERFAMILY Phospholipase D/nuclease 499 734 - -
Acco10g1998 824 FunFam Phospholipase D 478 711 - -
Acco10g1998 824 Gene3D C2 domain 6 171 IPR035892 -
Acco10g1998 824 PANTHER PHOSPHOLIPASE D 4 812 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1998 Acco-ChrAcco10 32601324 32604700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1998 4 824 Phospholipase D Gene Family (Wang group) AT3G15730 62.500 0.0 1045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1998 10 32601324 32604700 Acco07g0748 07 9243414 9246566 ECH
Acco10g1998 10 32601324 32604700 Acco09g1327 09 28572246 28575559 ECH
Acco10g1998 10 32601324 32604700 Acco10g1998 10 32601324 32604700 ECH