Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1997 ATGCTCAAGATCATTCTTCTTCGACTTCGTTTTCTTTCTCAATTCCCAGAAACATGGAACGACAGAGACGCGTGGACTGTTCAGTTGTTCAGATCCATTGATGGTGGTGCAGCTTCTGGTTTTCCTCAAGACCCATCTAAAGCATGTGGATTAGGCCTTGTTAGTGGGAAAGATAACGTTATTGATAGAAGTGTTCAGGATGCTTACATAAATGCTATTAGGCGAGCCAAGAACTTCATCTACATCGAAAACCAGTATTTTCTAGGGAGCTCATATGGTTGGATAGGGTCTGACATAAAAGTTGAAGATATTGGGGCTTTGCATCTTATACCAAAGGAGCTATCTTTGAAGATTGTGAGCAAGATTGAAGCAGGAGAAAGGTTTGCCGTGTACATTGTGATCCCAATGTGGCCGGAAGGTATCCCTGACAGTGGTTCTGTTCAAGCAATATTGGATTGGCAAAGAAGGACGATGGAGATGATGTATACTGATATTGCTGCTGCTATTCAGAGAAAAGGAATCAGAGTCCACCCTAGAGATTACTTGACATTTTTCTGCCTTGGAAATCGAGAGAGTAAGAAATCTGGAGAATATGTTCCTCCAGAGAGACCAGATCCTGACAGCGATTACAGCAAAGCACAAAATGCCAGGCGCTTCATGATCTACGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAACCAGAGATCAATGGATGGTGCGAGGGACACTGAGATTGCAGTGGGTGCGTTCCAACCATATCATCTCGCATCCTATGGCCCACCCAAAGGTCAGATATATGGGTTTAGACGAGCTTTATGGTACGAACATCTTGGGAAACCTGAAGGTGATGAAGCCTTTGACCATCCAGAAAGTGAACATTGTGTGAAGCTTGTGAATTATCTCTCAGACTTGAATTGGGAAAAATATTCAAATCCAACATTTGATCCACGAGGTTCATTCAACCACCTCATGCGTTATCCTATAGATATAACCAAAGATGGGAATGTAACAAAACTACAAGAGTTTGAATTCTTTCCTGACACTAAGGCTTCTGTTCTTGGCTCCAAATCAAGCCTTCCTCCAATCCTCACCACCTAG 1128 0.4238 MLKIILLRLRFLSQFPETWNDRDAWTVQLFRSIDGGAASGFPQDPSKACGLGLVSGKDNVIDRSVQDAYINAIRRAKNFIYIENQYFLGSSYGWIGSDIKVEDIGALHLIPKELSLKIVSKIEAGERFAVYIVIPMWPEGIPDSGSVQAILDWQRRTMEMMYTDIAAAIQRKGIRVHPRDYLTFFCLGNRESKKSGEYVPPERPDPDSDYSKAQNARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDTEIAVGAFQPYHLASYGPPKGQIYGFRRALWYEHLGKPEGDEAFDHPESEHCVKLVNYLSDLNWEKYSNPTFDPRGSFNHLMRYPIDITKDGNVTKLQEFEFFPDTKASVLGSKSSLPPILTT 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1997 375 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 219 246 IPR001736 GO:0003824
Acco10g1997 375 SMART pld_4 219 246 IPR001736 GO:0003824
Acco10g1997 375 PANTHER PHOSPHOLIPASE D 17 365 IPR015679 -
Acco10g1997 375 FunFam Phospholipase D 32 265 - -
Acco10g1997 375 SUPERFAMILY Phospholipase D/nuclease 65 291 - -
Acco10g1997 375 Gene3D Endonuclease Chain A 34 262 - -
Acco10g1997 375 Pfam Phospholipase D C terminal 293 366 IPR024632 -
Acco10g1997 375 Pfam Phospholipase D Active site motif 220 246 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1997 Acco-ChrAcco10 32596297 32600371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1997 3 375 Phospholipase D Gene Family (Wang group) AT3G15730 65.526 7.44e-175 505