Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1975 ATGGGGAAGGCCGCCGGGAAGAAGAAGGATCTCTCAGACCATCACAAGGCTGCAAATGGAAACGGCAAGACTAGCAAGCTCTCTGACCGAACCTCCAAACCTATTGTTGATGAAGACACAGCTATTTTCGTCAACATGTCTCATGAACTCAAGGAAGAAGGTAACAAACTCTCTCAAAAGAAGGATTACCAGGGAGCTATAACCAAGTATGATAAGGCCCTCAAGCTCCTTCCAAAAAATCACATAGAAATTGCTCTCCTCCGAAGCAATATGGCTTTGTGTTATATGCAAATGGGTCTTGGGGAATACCCCAAAGCAATCAATGAATGTAATTTAGCATTAGAGGTATCACCCAGATACAGCAAAGCTCTGTTGAGAAGAGCAAAGTGCTATGAAGAATTGAACCGTTTGGATTTGGCTCTGAGAGATGTTCATAGTGTTTTGAGCTGGGAACCCAATAACCTTCATGCATTGGAGATCATGGAGAGTTTGAAGAAGACAATGGAGGAGAAGGGCATCACTATTGATGAACAAGAGATTGGTTTGGCTATTCCCGCCGGTGGTGGTGCTCGCTTGCGTAATGTGGTCAGAGAGAAACTAAAGAAAAAGAAAGGCAAAAGGAGAGAGACAGACAAGGCAGAGGATAAGGTCGTTGTTGCTGAGGAGAATCTGAATGCTGCAAAAACTGAAGAAATAGTGACAAAAACAATTGATAAGGAAAAACTGATTCAGGAACATGTCAGGGAAGAAACAAAGGTAACAAGGACGGCGAAGTTGGTCCATGGAGAGGATATAAGGTGGGCGCAGTTACCTGTGAATTGTAGTCTGAAATTGGTAAGGGACATTATTAGGGATCGCTTTCCAGGCTTGAAAGGTGTTCTTGTGAAATATAAAGATCAAGATGGCGATTTGGTCACAATCACTACCACTGAGGAACTAAAGTTAGCTGAATCTTCAGGTCATGTCGTGGGCTCGATTCGACTCCATATCATAGAAGTTGATCCAAGTCAGGAACCACCATCTTATGAAGAAATAGCCACTGAAAAAGAGGTGCCAACAGATGATGATGCTATCAAGCAAAATGGTCCTACGGAAGAAGCCAAAGATCTTGTAACAAAAAGGACGACCACTATGGAGGACTGGATTGTTCAATTTGCTAGGCTGTTTAAGAACCATGTTGGGTTTGATTCTGATGGATATTTGGATCTTCATGAGATAGGAATGACGCTGTACACAGAAGCAATGGAGGATAGCATAACAAGTGATGAAGCTCAAGAAATTTTTGATATTTCTATGGATAAATTTCAAGAGATGGCAGCTTTAGCCTTGTTTAACTGGGGGAATGTTCACATGTCCAAGGCAAGGAAACGACCTACCATGTCAGAGGACGAGTCAAGTGAATCTTTTTTCGAGAACATTAACGCTACATACGAGTGGGCACAAAAGCAGTACAAGCTAGCAGAAAAGAGATACGAAGAAGCTGTGAAAATCAAACCAGACTTCTATGAAGGCTATCTTGCTCTTGGTTATCAACAATTTGAACAAGCAAAACTGTGTTGGTTCTATGCAATTGCATGCAAGAAGGAACTAGAATCAGGGCCTTCTGATGAGGTTTTACAACTCTATAACAAGGCAGAGGACAGCATGGAGAAAGGCATGTTGATGTGGGAGGAAATGGAGGAACAGCGATTGAATGGACTATCCAAATCAGAAAAATATAAGGCTCAATTGGAGAAGATGGGTTTGGATGGCATTTTTAAGGATGTTTCTTTTAATGAAGCTACAGAGCAAGCTGACAACATGAGATCACAGATAAATCTTTTGTGGGGTACTTTATTGTATGAACGTTCTGTTGTAGAATATAAGTTAGGCTTACCAACATGGGAGGAATGTTTGGAGATTTCAGTTGAAAAGTTTGAACTTGCTGGAGCTTCTCAAACTGATATAGCAGTCATGGTAAAAAACCATTGTTCCAATGTAACAGCACTCGAAGGTTGGGGGTTCAAAATTGATGAAATTGTACAGGCGTGGAATGAGATGTACGATGCTCAGAGGTGGCAATATGGAGTTCCATCGTTTAGACTTGAACCATTGTTTCGTCGGCGAGCCTCGAAACTTCACTACTTGTTGGAGCAATTTTGA 2142 0.4169 MGKAAGKKKDLSDHHKAANGNGKTSKLSDRTSKPIVDEDTAIFVNMSHELKEEGNKLSQKKDYQGAITKYDKALKLLPKNHIEIALLRSNMALCYMQMGLGEYPKAINECNLALEVSPRYSKALLRRAKCYEELNRLDLALRDVHSVLSWEPNNLHALEIMESLKKTMEEKGITIDEQEIGLAIPAGGGARLRNVVREKLKKKKGKRRETDKAEDKVVVAEENLNAAKTEEIVTKTIDKEKLIQEHVREETKVTRTAKLVHGEDIRWAQLPVNCSLKLVRDIIRDRFPGLKGVLVKYKDQDGDLVTITTTEELKLAESSGHVVGSIRLHIIEVDPSQEPPSYEEIATEKEVPTDDDAIKQNGPTEEAKDLVTKRTTTMEDWIVQFARLFKNHVGFDSDGYLDLHEIGMTLYTEAMEDSITSDEAQEIFDISMDKFQEMAALALFNWGNVHMSKARKRPTMSEDESSESFFENINATYEWAQKQYKLAEKRYEEAVKIKPDFYEGYLALGYQQFEQAKLCWFYAIACKKELESGPSDEVLQLYNKAEDSMEKGMLMWEEMEEQRLNGLSKSEKYKAQLEKMGLDGIFKDVSFNEATEQADNMRSQINLLWGTLLYERSVVEYKLGLPTWEECLEISVEKFELAGASQTDIAVMVKNHCSNVTALEGWGFKIDEIVQAWNEMYDAQRWQYGVPSFRLEPLFRRRASKLHYLLEQF 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1975 713 MobiDBLite consensus disorder prediction 1 20 - -
Acco10g1975 713 Gene3D Tetratricopeptide repeat domain 43 180 IPR011990 GO:0005515
Acco10g1975 713 MobiDBLite consensus disorder prediction 1 32 - -
Acco10g1975 713 SUPERFAMILY CAD & PB1 domains 255 339 - -
Acco10g1975 713 PANTHER PROTEIN CLMP1 1 711 IPR044517 -
Acco10g1975 713 ProSiteProfiles TPR repeat profile. 121 154 IPR019734 GO:0005515
Acco10g1975 713 SMART PB1_new 254 333 IPR000270 GO:0005515
Acco10g1975 713 Coils Coil 203 230 - -
Acco10g1975 713 SMART tpr_5 121 154 IPR019734 GO:0005515
Acco10g1975 713 SMART tpr_5 47 80 IPR019734 GO:0005515
Acco10g1975 713 SMART tpr_5 85 120 IPR019734 GO:0005515
Acco10g1975 713 SMART tpr_5 468 501 IPR019734 GO:0005515
Acco10g1975 713 SUPERFAMILY TPR-like 47 516 IPR011990 GO:0005515
Acco10g1975 713 ProSiteProfiles PB1 domain profile. 254 333 IPR000270 GO:0005515
Acco10g1975 713 ProSiteProfiles TPR repeat profile. 47 80 IPR019734 GO:0005515
Acco10g1975 713 Gene3D Tetratricopeptide repeat domain 415 584 IPR011990 GO:0005515
Acco10g1975 713 Gene3D - 241 332 - -
Acco10g1975 713 SUPERFAMILY TPR-like 437 675 IPR011990 GO:0005515
Acco10g1975 713 CDD PB1 262 330 - -
Acco10g1975 713 Pfam PB1 domain 255 330 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1975 Acco-ChrAcco10 32428753 32430994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1975 37 170 Calmodulin-binding Proteins AT3G25230 30.769 1.53e-08 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2225 05 38283260 38288258 Acco10g1975 10 32428753 32430994 CCT