Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1945 ATGGAGGAGGAGAAAAATACAGTGTTTGGCAAGTATGAGATGGGTAGGCTTCTGGGCAAAGGGACTTTCGCCAAGGTGTATCACGGCAAACAGATAGCCACCGGTGAGAGCGTGGCCATCAAGATCGTGAGCAAGGAGCAGGTAAGGAAGGAGGGCATGATGGATCAGATCAAGCGAGAGATTTCCGTTATGCGACTGGTTCGTCACCCAAACGTCGTTGAGCTCAAAGAAGTGATGGCCACAAAGACCAAAATTTTCTTCGTCATGGAGTACGTCCGCGGCGGCGAGCTCTTCGCCAAGGTCGCCAGAGGCAAACTCAAGGAAGATGTCGCTCGCAAGTACTTCCAACAATTAATCAGCGCCGTCGATTTCTGTCACAGCAGGGGAGTATCTCACCGGGATCTCAAGCCTGAAAATCTTTTGCTCGATGAGAACGAGAATCTCAAAATCTCTGACTTTGGCCTCTCGGCGTTGCCGGAACATCTCCGTCACGACGGTCTCTTCCACACCCAGTGTGGTACTCCGGCGTATGTCGCCCCCGAGGTGTTGAGAAAGAAAGGGTATGATGGGTCCAAGGCTGATATATGGTCGTGCGGTGTCATTCTGTATGCATTGCTCGCTGGGTTTCTTCCTTTTCAGAACGAGAATCTCATGAGTATGTATAGCAAGGTTTTAAAAGCCGAATTCCAATATCCGCCATGGTTTTCTGCTGAATCGAGGAGATTGATTTCGAAAATACTCGTGGCTGATCCAGAGAGACGGGCTACGATCCCGGCAATAATGCGGGTCCCATGGTTTCTGAAAGGTTTCTCGAGACCGTTCGCTTTTCAACTAGAGGAACCCGTTTCCGATGATAAGGAACTGCAGAAATCAGAGCCTGCAAACCCACCAAAATCGAAACCTTCATCGCCCAAGTTTTTTAATGCGTTCGAGTTTATTTCGTCCATGTCTTCTGGGTTTGATTTGTCTGGGTTGTTCGAGAGCAAGAGGAAAACAGGGTCGATGTTCACATCCAAATGCTCGGCGACGGCGATCGTATCGAAGATTGAGACGGTGGCAAGAGGGCTGAGTTTTAAGGTAGGGAATGAGAAGGGTTTCAAGATGAGGCTGCAAGGGCCGTCAGAGGGGAGGAAAGGGAGGCTGACGGTGACGGCGGAGGTGTTCGAGGTGGCACCGGAGGTGGCAGTCGTGGAGTTCTCAAAGAGCTCCGGCGATACTCTGGAATATGCAAAGTTTTGTGAGGAAGAAGTTAGGCCGGCGCTTAAAGACATAGTGTGGACGTGGCAAGGCGACAGCCTGGGCAATGGTAACATGGGTGGCGGTTACGGAGAAGAATCTCAGGGACAAGTTATTAGCAACGTAGTATAG 1368 0.5051 MEEEKNTVFGKYEMGRLLGKGTFAKVYHGKQIATGESVAIKIVSKEQVRKEGMMDQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKVARGKLKEDVARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEHLRHDGLFHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQNENLMSMYSKVLKAEFQYPPWFSAESRRLISKILVADPERRATIPAIMRVPWFLKGFSRPFAFQLEEPVSDDKELQKSEPANPPKSKPSSPKFFNAFEFISSMSSGFDLSGLFESKRKTGSMFTSKCSATAIVSKIETVARGLSFKVGNEKGFKMRLQGPSEGRKGRLTVTAEVFEVAPEVAVVEFSKSSGDTLEYAKFCEEEVRPALKDIVWTWQGDSLGNGNMGGGYGEESQGQVISNVV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1945 455 CDD CIPK_C 308 422 - -
Acco10g1945 455 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1945 455 CDD STKc_SnRK3 11 265 - -
Acco10g1945 455 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Acco10g1945 455 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Acco10g1945 455 SUPERFAMILY Protein kinase-like (PK-like) 8 308 IPR011009 -
Acco10g1945 455 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1945 455 Gene3D Transferase(Phosphotransferase) domain 1 2 305 - -
Acco10g1945 455 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1945 455 FunFam Non-specific serine/threonine protein kinase 5 303 - -
Acco10g1945 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Acco10g1945 455 FunFam Non-specific serine/threonine protein kinase 302 426 - -
Acco10g1945 455 Pfam NAF domain 304 360 IPR004041 GO:0007165
Acco10g1945 455 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 423 - -
Acco10g1945 455 Gene3D Kinase associated domain 1, KA1 306 427 - -
Acco10g1945 455 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1945 Acco-ChrAcco10 32205920 32207287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1945 1 432 CBL-interacting serine-threonine protein kinases AT5G10930 70.252 0.0 653
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco10g1945 Pkinase 1.2e-74 CL0016