Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1944 ATGGAATCAACATGCGTGGACACCTCTCTCAACCTCAACGTTGGTCCCCGGGACACACAAGAAACGACGGGTGAGGATTTGGTGCAAGAGTTGAATCGTTTGAACAGTGAGAATCAGAATCTAACGGAGAGACTGACACACTTGAGTGAGAAGTACAATCTTTTGAAAAAGCAGTTGATCCAAGTGATGACCAACAACACCGATAATAATACTAGCCCTGAAAGTGATCCAACCAGTAATCAATCATCAAGGAAGAGAAAAGCGGAGACGGAAGACTGTAAGGATAATATGATTAGTATTAGCGGCAATAATACTGAGAGCATAAGCAACATTACCGACGAAGATTCGTCGTTCAGAAGGCCATCCGCTAGGGTTGCCAGAGTTATGGTGCGCACCCAACCATCAGATACTAGCTTGTACGTGAGGGATGGATATCAGTGGAGGAAATATGGTCAGAAGGTGACTCGAGATAACCCTTCACCAAGAGCTTACTTCAGGTGCTCCTTTGCACCAAGCTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGCGGAAGACCCGACAGTGTTGGTGGCGACCTACGAAGGAGAGCACAACCATGGAGGACATGGATCTGGATTACCAACCCTAGCGTCGAACCAGAGCAAAAGTGAATCAGGAGGATTCATATTGGGTGAAAATGGAGGGAAGTCAATGCAGCAGTGTTTGGTTCAACAAATGGCCACTTCTTTGACCAGAGATCCCAACTTTACAGCTGCACTCGCCACCGCCATCTCCGGCAGAATTTTAAACTTCGTTTCTAATTAA 804 0.4627 MESTCVDTSLNLNVGPRDTQETTGEDLVQELNRLNSENQNLTERLTHLSEKYNLLKKQLIQVMTNNTDNNTSPESDPTSNQSSRKRKAETEDCKDNMISISGNNTESISNITDEDSSFRRPSARVARVMVRTQPSDTSLYVRDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPTVLVATYEGEHNHGGHGSGLPTLASNQSKSESGGFILGENGGKSMQQCLVQQMATSLTRDPNFTAALATAISGRILNFVSN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1944 267 ProSiteProfiles WRKY domain profile. 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g1944 267 Coils Coil 24 58 - -
Acco10g1944 267 MobiDBLite consensus disorder prediction 65 79 - -
Acco10g1944 267 MobiDBLite consensus disorder prediction 1 22 - -
Acco10g1944 267 MobiDBLite consensus disorder prediction 65 116 - -
Acco10g1944 267 MobiDBLite consensus disorder prediction 96 116 - -
Acco10g1944 267 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g1944 267 SMART WRKY_cls 141 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g1944 267 SUPERFAMILY WRKY DNA-binding domain 138 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g1944 267 FunFam WRKY transcription factor 40 126 203 - -
Acco10g1944 267 MobiDBLite consensus disorder prediction 205 220 - -
Acco10g1944 267 Gene3D WRKY domain 124 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g1944 267 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 227 261 IPR044810 GO:0003700
Acco10g1944 267 MobiDBLite consensus disorder prediction 196 223 - -
Acco10g1944 267 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1944 Acco-ChrAcco10 32197557 32198890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1944 27 262 WRKY Transcription Factor Family AT2G25000 50.417 5.01e-67 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco10g1944 WRKY 6.6e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2192 05 37958426 37960234 Acco10g1944 10 32197557 32198890 CCT