Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1935 ATGGATGATGCTTCTGCGCTCAGAGCCGCCGTAGATATTAAAAATCAGCCTCAGCGTCTTGACTTTGAGGGTGAGGATGATCACAAAGCGGTCGTTTTCTTGGGTTCTCTGCACGGGGCCTTTGCTGGCCAAAGAAGAATGGGGGTTTACCTCAGCACTCCCAAAACTGAAAAGTTTTCTGAAGATGGTGAGAATGACCGTCTTAGATATGGTTTATCGTCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGACATGGAGGGAAGGTGGTTGCAAAGTTCTGTGCCAAGTATCTTCACCAACAGGTGCTTGCAACCGAATCATATCAGGCTGGAGATATAGGAACCTCCCTTCAGAAAGCCTTTTTCCGAATGGATGAGATGATGCGTGGCCAAAGGGGCTGGAGGGAATTAGCAGTCTTGGGGGATAAGATGAATAAATTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCAAGAAACAATGAAAATAATGATCATGTTGACGATTGGGCTTTTGAGGAGGGCCCCCATTCTGATTTTGCTGGACCAACATCAGGAAGCACAGCATGTGTTGCAATTATTAGAAACAATCAATTAATTGTTGCGAATGCTGGTGATTCACGTTGCGTGATATCTAGAAATGGTCAGGCATACAACTTGTCTAGAGATCACAAACCTGATCTTGAGGCCGAGAAGGAAAGAATTTTAAAAGCTGGTGGTTTCATTCATGCTGGACGAGTAAATGGCAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAATTTCTCCCTGCTGAAAAACAAATTGTCACTGCCAATCCTGATATAAACACAGTTGAGCTTTGTGGAGACGACGAATTTATAGTGCTAGCATGTGATGGCATATGGGATTGCATGTCAAGCCAGCAGTTGGTAGATTTTGTGCTGGAACAACTGCGTTCGGAAAGTAAACTTTCTGTGGTGTGTGAAAGAGTACTTGATCGGTGTTTGGCGCCATCAACTGTGGGGGGCGAGGGATGTGATAACATGACAATGATATTGGTGCAGTTCAAGAAACCGACCCACTTCAAAGCAGCAGGAGCAGAAGAGTCATCTTCTGAAGCTGAAGCTAATAATTCAGAGGATACGAACCAGAGTGAGTAG 1218 0.4425 MDDASALRAAVDIKNQPQRLDFEGEDDHKAVVFLGSLHGAFAGQRRMGVYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLATESYQAGDIGTSLQKAFFRMDEMMRGQRGWRELAVLGDKMNKFTGMIEGLIWSPRNNENNDHVDDWAFEEGPHSDFAGPTSGSTACVAIIRNNQLIVANAGDSRCVISRNGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCGDDEFIVLACDGIWDCMSSQQLVDFVLEQLRSESKLSVVCERVLDRCLAPSTVGGEGCDNMTMILVQFKKPTHFKAAGAEESSSEAEANNSEDTNQSE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1935 405 ProSitePatterns PPM-type phosphatase domain signature. 98 106 IPR000222 GO:0043169
Acco10g1935 405 PANTHER PROTEIN PHOSPHATASE 2C 58 374 IPR015655 GO:0004722|GO:0006470
Acco10g1935 405 CDD PP2Cc 69 375 IPR001932 -
Acco10g1935 405 Gene3D - 46 376 IPR036457 -
Acco10g1935 405 Pfam Protein phosphatase 2C 69 149 IPR001932 -
Acco10g1935 405 Pfam Protein phosphatase 2C 199 359 IPR001932 -
Acco10g1935 405 MobiDBLite consensus disorder prediction 390 405 - -
Acco10g1935 405 SMART PP2C_4 59 373 IPR001932 -
Acco10g1935 405 SMART PP2C_SIG_2 74 375 IPR001932 -
Acco10g1935 405 MobiDBLite consensus disorder prediction 383 405 - -
Acco10g1935 405 ProSiteProfiles PPM-type phosphatase domain profile. 69 375 IPR001932 -
Acco10g1935 405 SUPERFAMILY PP2C-like 49 376 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1935 Acco-ChrAcco10 32134258 32139905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1935 47 378 PP2C-type Phosphatase Gene Family AT2G25070 79.217 0.0 584