Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1920 ATGGTTTGTGAGATGGAGAATGACTATACCGAGGACATGGACATCGAAGTCCTCCATTCGATGTGGCCTGAAGATATTGGAACTGATGTTGGCAAAAAATTTAATATAGAAAAGCCTGGAAAGGACCAAGATATGTTGGAAGAGATTATAATGATGGAATCAACTATAGTTGATTTCAAGCGTCTCATGGAGCTCACAAATTATACAGATAAAGGTTCTTCTCAACTTTCACACCTTATGAAACACTGGGAGTATAAGCAAGCCAATGCCTTGCAACTTCTCAGAGAAGAACTTGACAACCTAAGCAAACAGAGGCATGAAGTTGAGCTGAGGAAGTTGCAGATACTGGAGGAGCATCGGTTCGAGGAAGAAACATATGGGGACAAACGTCCAGTTTCTATTTTGGATGAAATTTATGATTTATGGCAAGATGCACCAAGAAGGAAAAAATGTGATGTTGTTGTTCAGAACAAGAGAATTGAAATAGATGCTGAGTATGATATAAGTGTACATTGGAAACAGAAGGCGCTGGATTTGGAAAAAATGTTGGAGGCAAGTGTCCAAAGAGAACAGATACTAGCAGAGAAGTTGCAAGAAAATATAAAGAATCTCGAGAAGCAGTCCTTACCTGTAGAAGAACTGTCCCAGATTCTGAAAAGGGCAGATAATTTCTTGCATTTTGTACTCCAGAATGCACCTGTGGTTATAGGTCATCAGGACAAAGAGTTGCGATATCGATTTATCTATAATCATTTTCCCAGTTTGCACGAGGAGGATATCATTGGAAAAACAGATGTTGAAATTTTTACAGGTTCTGGTGTTAAAGAATCTCAAGATTTTAAGAGAGAAGTTCTAGAAAAAGGCTTGCCTGCGAAAAGGGAAATTACTTTCGAGACAGAATTATTTGGTTCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGACAGGGGAGACCCTAGGAATAAACTACATGGGAATGGATGTCACAGATCAGGTGAGAAAAAGAGAAAGGATGATGAAGATCCGGGAAGAAATTGCGGTTCAGAAAGCCAAGGAAACAGAACTGAATAAAACCATCCACATTACAGAGGAGACTATGAGAGCAAAACAAATGCTGGCAACCATGTCTCATGAGATAAGATCCCCATTGTCTGGGGTTGTTAGCATGGCTGAGATTCTTTCGAGGACAACACTTGACCGTGAGCAAAGACAGTTCTTGGATGTCATGCTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTAATGAAGTTAGAAGCAACCAAGTTCCGGCCAAGAGAGGTAGTAAAGCATGTACTCCAGACTGCTGCAGCTTCACTGCAGAAAATATTAACCTTAGAAGGACATGTAGCAGATGATGTACCAACTGAGGTCATTGGAGATGTTTTAAGGATTCGGCAAATCCTCACAAATTTAGTCAGCAATGCTATCAAGTTTACTCATGAAGGCAAGGTTGGTATAAATCTTTATGTTGTGCCAGAGCCATCTTTTGCTAAAGCAGAAGTAAGCCTGCAGAAGACAAGGGCAGACCAGTCTAGCATTTCAGGGAATGGAGTAGAAGAGAAGAAGTATCTTTCAATACCTCAAAATAGCAGTAACCAAAATCAAGCTTTGAGTGATGAAGGTAGATCTCCGGTTAAAAGTGAATGCTTGATCAATGGAGTTACTGAGGAACAACCTCAATCTACTGAGACAACAGTGTGGATACGGTGTGATGTCTATGACACAGGAATTGGAATACCAGAGAAGGCTATGCCTACTTTATTTAAAAGGTACATGCAAGTCAGTGCCGACCATGCAAGAAAGTATGGTGGGACAGGGCTGGGACTAGCAATATGCAAACAACTGGTTGAGTTAATGGGTGGTTGTCTTAATGTGACTAGCAAAGAACAATGTGGTTCTACATTTACCTTCATATTGCCATATAAGGTTTCAACTATTTGTGATCATTCTGATGAGCCCTCAGATACAGAGGATGATGATGATGATGCGTCTGATGATACTGCAGAAGGCTTTTTCCAATTTCAGCCACCCTCTTTGGGCTCTCTATTCTCCTCCCATGGATCTAGCAGGGCCCAAAAATTATTCCCTCAAGAAATTGGGTGTGCAACATCGTGTAAATTCAATAGCTTTTCAGAGAATTCCAATTCAATTTCTTCTAATAACGTCAAATCAAAAGAAATAACTTCAGATGAGATTGCATCCTCAATAACTGATGGCCCGGACATATCTGAATCTGCATGTTCATCGAGTCACAGCCCAGAGATAGAGAATGAAAATGTAGGTAGAAGAAACAAATCACGAAATGGCAGTGCATATTCTTCATATCACAGGGAGTTAGATCAAGATCGGACAGCTATAGCAACAATGTCAAGAGAACAAGCACATCAGAGTCAAGAAAGAGTAGAGATTACCTCGCAATGCGTCACTATCAGCAGTACATCAGAAGTAGCAAAACCAGATTTAAAGCCCAAGATCCTTCTCGTGGAGGATAACAAGATCAATGTCATGGTGACACAGTCAATGATGAAGCAATTAGGTCATAGCATAGATGTTGTGAATAACGGAGTGGAAGCTGTATGTGCCGTTCAGCACCAGAGCTATGACCTAATTCTGATGGATGTGTGCATGCCAGTTATGAATGGTCTACAAGCAACAAGATTGATTCGTTCTTTTGAAGAAAATGGTAACTGGGATGCTGCAAGAGAAGCTGGAATTGAGCTAAATCTACCAGCTTCATCATGTTTATCTGCCACCAAATCGAACCACATCCCCATTATTGCGATGACAGCAAATGCACTGTCAGAGAGTGCTGAAGAGTGTTATGCAAATGGTATGGACTCATTTGTATCAAAACCTGTGACTTTCCAAAAATTGAAAGATTGTCTTGAGCAGTACTTACGGTGA 2970 0.4037 MVCEMENDYTEDMDIEVLHSMWPEDIGTDVGKKFNIEKPGKDQDMLEEIIMMESTIVDFKRLMELTNYTDKGSSQLSHLMKHWEYKQANALQLLREELDNLSKQRHEVELRKLQILEEHRFEEETYGDKRPVSILDEIYDLWQDAPRRKKCDVVVQNKRIEIDAEYDISVHWKQKALDLEKMLEASVQREQILAEKLQENIKNLEKQSLPVEELSQILKRADNFLHFVLQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDVEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKTGETLGINYMGMDVTDQVRKRERMMKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSRTTLDREQRQFLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPTEVIGDVLRIRQILTNLVSNAIKFTHEGKVGINLYVVPEPSFAKAEVSLQKTRADQSSISGNGVEEKKYLSIPQNSSNQNQALSDEGRSPVKSECLINGVTEEQPQSTETTVWIRCDVYDTGIGIPEKAMPTLFKRYMQVSADHARKYGGTGLGLAICKQLVELMGGCLNVTSKEQCGSTFTFILPYKVSTICDHSDEPSDTEDDDDDASDDTAEGFFQFQPPSLGSLFSSHGSSRAQKLFPQEIGCATSCKFNSFSENSNSISSNNVKSKEITSDEIASSITDGPDISESACSSSHSPEIENENVGRRNKSRNGSAYSSYHRELDQDRTAIATMSREQAHQSQERVEITSQCVTISSTSEVAKPDLKPKILLVEDNKINVMVTQSMMKQLGHSIDVVNNGVEAVCAVQHQSYDLILMDVCMPVMNGLQATRLIRSFEENGNWDAAREAGIELNLPASSCLSATKSNHIPIIAMTANALSESAEECYANGMDSFVSKPVTFQKLKDCLEQYLR 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1920 989 CDD REC_hyHK_CKI1_RcsC-like 847 984 - -
Acco10g1920 989 Gene3D - 841 989 - -
Acco10g1920 989 MobiDBLite consensus disorder prediction 755 777 - -
Acco10g1920 989 FunFam Histidine kinase 5 212 347 - -
Acco10g1920 989 Gene3D - 358 435 - -
Acco10g1920 989 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 8 988 - -
Acco10g1920 989 SUPERFAMILY CheY-like 845 989 IPR011006 -
Acco10g1920 989 Pfam Response regulator receiver domain 847 914 IPR001789 GO:0000160
Acco10g1920 989 Pfam His Kinase A (phospho-acceptor) domain 372 435 IPR003661 GO:0000155|GO:0007165
Acco10g1920 989 MobiDBLite consensus disorder prediction 755 800 - -
Acco10g1920 989 SMART HKATPase_4 481 665 IPR003594 -
Acco10g1920 989 ProSiteProfiles Histidine kinase domain profile. 377 665 IPR005467 -
Acco10g1920 989 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 424 664 IPR036890 -
Acco10g1920 989 Gene3D - 436 669 IPR036890 -
Acco10g1920 989 ProSiteProfiles Response regulatory domain profile. 846 988 IPR001789 GO:0000160
Acco10g1920 989 PRINTS Bacterial sensor protein C-terminal signature 625 643 IPR004358 GO:0016310|GO:0016772
Acco10g1920 989 PRINTS Bacterial sensor protein C-terminal signature 590 604 IPR004358 GO:0016310|GO:0016772
Acco10g1920 989 PRINTS Bacterial sensor protein C-terminal signature 649 662 IPR004358 GO:0016310|GO:0016772
Acco10g1920 989 SMART HisKA_10 370 435 IPR003661 GO:0000155|GO:0007165
Acco10g1920 989 CDD HisKA 372 431 IPR003661 GO:0000155|GO:0007165
Acco10g1920 989 FunFam Putative histidine kinase 5 358 435 - -
Acco10g1920 989 Coils Coil 91 118 - -
Acco10g1920 989 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 663 IPR003594 -
Acco10g1920 989 CDD HATPase_EvgS-ArcB-TorS-like 486 662 - -
Acco10g1920 989 Gene3D PAS domain 212 346 - -
Acco10g1920 989 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 369 435 IPR036097 GO:0000155|GO:0007165
Acco10g1920 989 SMART REC_2 845 984 IPR001789 GO:0000160
Acco10g1920 989 FunFam Histidine kinase 5 837 989 - -
Acco10g1920 989 MobiDBLite consensus disorder prediction 671 692 - -
Acco10g1920 989 MobiDBLite consensus disorder prediction 674 689 - -
Acco10g1920 989 Coils Coil 180 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1920 Acco-ChrAcco10 32033706 32037950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1920 1 988 Histidine Kinase Gene Family AT5G10720 58.000 0.0 1112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco10g1920 HATPase_c 9.9e-27 CL0025