Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1917 ATGAATGGTGATGTCCTTGACAATTCTTTCTCCTTTATTTTTTCTGGGGTTTTCTTCTTTGAACGAGTGAATCCCTTGGTTCTTTTACTTTCATGTTTAGGCTTGACTTTGTGGGATGGATTGGAATGCGTGCGGGAGGGGGAGTTGCTCAGCAAAGGCGTGTTTGGAGACCGGCATGGTTTCCTTTCCCCCTGGACAAGAAAAACGATTTGCGAAGGATATATAAACCAACCCAAGCAACGACGCTTCCCAGATTTCTTATTTGATACCAGAAGAAGAAAAATGGAATCGGAGGATTCGGTGAAGCTGCAATTGGAGGAATTGCAGAAACTTTTGGGGAAGAAGCAAAAGTTCGAGGACGCTGTCTTCTCTCTCAAATCCCTCCTACAACAAAATTATCCTTCTGCTTCTCCTTCTCTCCGCAAATCGTTTTATACAGCTATCTGCCGAGTTGCTACTGTATTGAAGACCAGGTTTACCGCACCGGGGTTCTGGAATGCTGGGCTGGGGCTTTTTGAGCAGGCTGAATTGCTTGTTTCTGATCCATCTGAGAAGGAACACTTGAAGGTTTGCATTTCTCAGGCGAGGGAAGAGTTGCATCTAGAGGACAATCCGACGCAAGCTGCCCAATCAGCTCAAAATCCTGTGAATGGAGGTTATCTTTTTGAGGGACACCTTACTGTAGATCCAGAGCCACCTCAGCCTCAATGGCTGGTGCAATCAAATCTCTTGACAACAGCTGCTACGCTATTTGCTGCTGAATCGTCTCAAGGTTTAGCGGCAGATGATACTGCACAGGAAAATGCTGCAAATATGCTTCAGGATCTTCTACATAGATTAGAAGATGCCGTGCCACTGATGCTGAGTGATGGTCCAGCACTTCCAAAAGTCCCTCCTGCTAGCAAAGAAGTTGTGGCAAAACTTCCGGTCATTACTCTTACAGAGGAAATTCTGGCTAAGCTAGGGAAAGATGCAGAGTGTGCAATTTGCAAGGAAAACTTGGCTCTAAATGACCAAATGCAGGAGTTGCCATGCAAGCACAAATTCCACCCAGCTTGTCTAAAGCCATGGCTGGATGAGCATAATTCATGCCCTATTTGTCGGTATGAGCTACAAACTGATGACCACGCCTATGAGAGCTGGAAGGAGCGTGAGAAGGAAGCAGAAGAAGAGAGGAAGGGTGCTGAAAATGCTGTTCGTGGTGGCGAATATATGTATGTTTAG 1224 0.4583 MNGDVLDNSFSFIFSGVFFFERVNPLVLLLSCLGLTLWDGLECVREGELLSKGVFGDRHGFLSPWTRKTICEGYINQPKQRRFPDFLFDTRRRKMESEDSVKLQLEELQKLLGKKQKFEDAVFSLKSLLQQNYPSASPSLRKSFYTAICRVATVLKTRFTAPGFWNAGLGLFEQAELLVSDPSEKEHLKVCISQAREELHLEDNPTQAAQSAQNPVNGGYLFEGHLTVDPEPPQPQWLVQSNLLTTAATLFAAESSQGLAADDTAQENAANMLQDLLHRLEDAVPLMLSDGPALPKVPPASKEVVAKLPVITLTEEILAKLGKDAECAICKENLALNDQMQELPCKHKFHPACLKPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAVRGGEYMYV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1917 407 MobiDBLite consensus disorder prediction 387 407 - -
Acco10g1917 407 FunFam E3 ubiquitin-protein ligase RNF181 290 374 - -
Acco10g1917 407 SMART ring_2 327 367 IPR001841 -
Acco10g1917 407 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 219 371 - -
Acco10g1917 407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 293 374 IPR013083 -
Acco10g1917 407 CDD RING-H2_RNF126-like 326 368 - -
Acco10g1917 407 Pfam Ring finger domain 326 368 IPR001841 -
Acco10g1917 407 ProSiteProfiles Zinc finger RING-type profile. 327 368 IPR001841 -
Acco10g1917 407 Coils Coil 378 398 - -
Acco10g1917 407 SUPERFAMILY RING/U-box 321 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1917 Acco-ChrAcco10 32003522 32006630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1917 101 407 C3H Transcription Factor Family AT5G20910 63.312 1.32e-127 369