Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1910 ATGGCTTCTCCGAATTCTGCGACGACTGAGATGAGTGATCATGATCAGTGTTTAAAGTACAAAGGCGTGAGGAAGCGAAAATGGGGTAAATGGGTATCTGAAATCAGACTACCCAACAGCCGCGAACGCATATGGCTTGGCTCTTATGATTCAGCAGAAAAAGCTGCTCGAGCTTTTGATGCTGCACTCTTTTGTCTACGTGGCGATCGAGCCAATTTCAACTTCCCTGACACTCCTTTCCTCTTTCATCTTCCTCATCATCCTCAACTTCTCACCCATCACCAGATTCAGCTTCTTGCTTCTTCCTTCGCCAATCAGCTCCACCACCAGCACCAGCCGCCGCCGGAGCCACCCCATGAAACAGAACCATCAGCAGAATTTCATTCTGTAAGTCCTGTGTCAGTGTCCGAGACTGGTTCTAGTTCTTGTACTTCATTTTCCTCTTGTATGCAAGTGGACGTGGACGTGGAGGAGCACGGTGGTGACAGCACTATAGATTGGTCATTTTTGAACTCGCTCGAATCCGACGACCTAGGTGCCTCCATTGGCTGTGGACTCTATTCTGAGTTAGATTACTTCCAGTTTGGTGAATCGATGACGTCCTCCGAGTTGTCTCTCATACCCCAAGACGTGCACTTCGACTACAATAATGCCCAGGAGAATCAATACGAAGATGCCTGTTCTCACAATTCATTCCTTTGGAACTTCGGATATGATTGTTCATAG 726 0.4752 MASPNSATTEMSDHDQCLKYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAALFCLRGDRANFNFPDTPFLFHLPHHPQLLTHHQIQLLASSFANQLHHQHQPPPEPPHETEPSAEFHSVSPVSVSETGSSSCTSFSSCMQVDVDVEEHGGDSTIDWSFLNSLESDDLGASIGCGLYSELDYFQFGESMTSSELSLIPQDVHFDYNNAQENQYEDACSHNSFLWNFGYDCS 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1910 241 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Acco10g1910 241 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Acco10g1910 241 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Acco10g1910 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 159 - -
Acco10g1910 241 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Acco10g1910 241 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Acco10g1910 241 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Acco10g1910 241 FunFam Ethylene-responsive transcription factor 2 19 77 - -
Acco10g1910 241 MobiDBLite consensus disorder prediction 106 136 - -
Acco10g1910 241 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
Acco10g1910 241 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1910 Acco-ChrAcco10 31951130 31951855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1910 19 105 AP2-EREBP Transcription Factor Family AT1G19210 68.966 8.67e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco10g1910 AP2 1.7e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1910 10 31951130 31951855 Acco10g1910 10 31951130 31951855 ECH