Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1907 ATGGGTGGTGGTGGTAGAGTTGAAGTTGTAAGTAGCAAGGGATGCTCTGGACTGTTTTCACCTTCATCACATTTATTCAGGGGTTTGCATCTGCAACCTTTGGAGCCAATGACTCCTGTTTCATCTTTTCACGGTTCTGAACCAGTGGAAGACCGATCAAGTGCTCCTTTTTCTGGTCTTGTTATATGCGTAACCGGTCTATCTAAAGAAGCAAGGAAACAGGTCATGGAGGCGACAGAGAGATTAGGTGGCCAATATAGCCCCCATTTGCATCCTCAATGTACCCATTTGGTGTTTGAGCATGCACTGAAGCATGGTGCAAGAAATGGTCTTTTTATTGTCACACTGGGTTGGTTTGTCAATAGTGTTAGAAAAAATGTGAGGTTGAGTGAATCACTTTACAGTGTGAAGAATTATGGCAATAACAGTACGAACTTGGATGATTACAAACTGCTTTCTGGGGATACAAATGCTGGAAATTCTTGTCTTCCTGTAAGTTTTCACGAAACCAAGCGAAATGATAGAGCTGAAGAATTTCAAAGATTTTCTGGACGAGAGTTTAGCAATAATTTGGATTTGCCTTTATCTGGTTGCTCTATATATGTTGATCCAGACATCTCACCTGAATTGCGAACTAAGGTCATCGAGACTGCTTCCAGAGAAGGTGCCAGTTTGATGGAGCAGTGGTTTGTTGGTTGTAATGCCAGTCATGTAGTCACCGAAGGGGCATCAATTCAAAGATATCTTGGATATTCTAGTAACTTCGTAACACCACTGTGGATTCTAAAAACAGCTAAGGAGAAACAAGTGCAAAGGCTTGTTCATATGTCTGCTGATTTGGTGAGGCAAGTGGGTTTGATGCTTGAGGACATTCATAATGGCATTACAGGGGAGGAATCACTTGAGCATAATCTCCCTGAAGACCTTCAGGTCGTTAAAAGTAAAGGAAGTTACAAAGAACGGCAGCAAGTTGTGAACTCTGCAAAAATAGGTGTCAGAAATCGCCGTGGTTGTCGAATGCAGACTTGTCAGACTCCAATGCGTCCTATAACACCTAACAACCTTCTGGATTCTATCTGCTGGTCAATATCTGAACCAACTTCAACAGCTTCCATTTACACTGACTCTTTCAGCGTTGAAGATGCTAGTGAAAATCACTTTTCAACCTTTGGTGATGCAAAGGGGGCCGTCAAAGATTTAGAAGCTTCATTTTCAAACTCTACTAGATCTCTAAGAGAAAGTGAGAAATCTGAACTGATATTTAAAAACCATTTTCTTACCATTCTCTTTCCAATTGATCGATTTGCCGAGATGGGTCCTTCATCAAGAACATTTTTCAGCCACAGCGGCTTTACATGCCTTCAGGTGTTGGATCATATATATGCATTTTATCAGGAGAATATGTTGGGGCATGAAATAGAAGCTGCAATTCATACAGATTCAAGACAAGCGGATAGGCTTCGATCAGTGTATAGCAGTAAAGAAGCAGAAGAACGTGGGTTTGTGATGTTCAAAAGGGTTGAGTTCTTGGGTAGTCGTACGAGTTTTGAAATGTTGAAACGTGTGACAGGGGACAACAACTCTAATGTCTACGAACTATTGCTCAGAGCCTAA 1614 0.4145 MGGGGRVEVVSSKGCSGLFSPSSHLFRGLHLQPLEPMTPVSSFHGSEPVEDRSSAPFSGLVICVTGLSKEARKQVMEATERLGGQYSPHLHPQCTHLVFEHALKHGARNGLFIVTLGWFVNSVRKNVRLSESLYSVKNYGNNSTNLDDYKLLSGDTNAGNSCLPVSFHETKRNDRAEEFQRFSGREFSNNLDLPLSGCSIYVDPDISPELRTKVIETASREGASLMEQWFVGCNASHVVTEGASIQRYLGYSSNFVTPLWILKTAKEKQVQRLVHMSADLVRQVGLMLEDIHNGITGEESLEHNLPEDLQVVKSKGSYKERQQVVNSAKIGVRNRRGCRMQTCQTPMRPITPNNLLDSICWSISEPTSTASIYTDSFSVEDASENHFSTFGDAKGAVKDLEASFSNSTRSLRESEKSELIFKNHFLTILFPIDRFAEMGPSSRTFFSHSGFTCLQVLDHIYAFYQENMLGHEIEAAIHTDSRQADRLRSVYSSKEAEERGFVMFKRVEFLGSRTSFEMLKRVTGDNNSNVYELLLRA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1907 537 Gene3D BRCT domain 55 138 IPR036420 -
Acco10g1907 537 SUPERFAMILY BRCT domain 59 147 IPR036420 -
Acco10g1907 537 SMART BRCT_7 54 126 IPR001357 -
Acco10g1907 537 SMART BRCT_7 192 268 IPR001357 -
Acco10g1907 537 ProSiteProfiles BRCT domain profile. 52 136 IPR001357 -
Acco10g1907 537 ProSiteProfiles BRCT domain profile. 190 270 IPR001357 -
Acco10g1907 537 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 4 537 - -
Acco10g1907 537 CDD BRCT_TopBP1_rpt2_like 56 126 - -
Acco10g1907 537 Pfam twin BRCT domain 60 102 IPR001357 -
Acco10g1907 537 Pfam Family of unknown function (DUF6699) 446 521 IPR046522 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1907 44 136 Core DNA Replication Machinery Family AT1G77320 38.776 5.06e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1907 10 31926187 31931303 Acco10g1907 10 31926187 31931303 ECH