Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1899 ATGAATTTCCGTCATGGCTCCAAAGTTTGGGTTGAAGACAGGGATTTGGCATGGGTGGCCGCTGAGGTCACCGGTTTTGCTGGAAAGCAAGCCCAACTTGTCACCGCTTCTGGGAAGAAGGTTTCTGCACTACCGGAGAAACTCTTCCCCAGGGATGCAGATGAAGAGGAGCATGGGGGAGTGGAGGATATGACGAGGCTGGCTTACTTGAATGAGCCGGGAGTTCTGTATAATCTTCAAAGAAGATATGCCCTGAATGATATATACACATATACAGGGAGCATTTTGATAGCTGTAAATCCATTCACGAAGCTTCCTCATCTGTATGATATCCATATGATGGAGCAGTATAAAGGAGCTCCATTTGGTGAGCTTAGTCCCCATGTATTTGCTGTTGCTGACGCTTCTTATAGAGCAATGATGGATGAAGGTCAAAGCCAGTCTATTTTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACTGAGACGACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGTGCTTCTGGTGATGATAGGACAGTTGAGCAACAAGTCCTTGAATCCAATCCCCTCTTGGAGGCTTTTGGTAATGCGAGGACTGTCTGGAATGACAATTCAAGTCGCTTTGGGAAGTTTGTTGAGATTCAGTTCAATTCAAATGGTAGAATATCTGGTGCCGCTATTCGAACTTACTTATTGGAAAGGTCACGAGTAGTGCAGATAACAGATCCTGAAAGAAACTATCACTGCTTTTATCAGTTGTGTTCATCTGAAAGGGATGCTGAGAAGTATAGGTTAGGACATCCAAGCCACTTTCACTATTTAAATCAAAGTAAAACATATGAATTGGAAGGAGTAAACAGTGCTGAAGAATACATGAAGACAAGGAGGGCAATGGATATAGTTGGTATATGCCATGAGGATCAGGAAGCCATATTTCGCACATTAGCTGGAATTTTACATTTGGGGAACGTTGAATTTTCTCCTGGAAAAGAACATGACTCATCAGTAATAAAGGATGAGAAGTCAAGGTTTCATTCGCAGATGGCAGCAGATCTCTTCATGTGTGATGTCAATCTATTGTTAGCAACATTGTGTACTCGCTCAATACAAACCCATGAAGGAAGTATTGTGAAAGCTCTTGATTGCAATGCAGCTGTTGCTGGTCGGGATGCTTTGGCTAAAACTATTTATGCACGCCTGTTTGACTGGCTAGTTGAAAAAATCAACAAGTCTGTTGGTCAAGATAAAAATTCCCGGATACAAATAGGAGTTTTGGATATATATGGTTTTGAGTGCTTTAAGGACAACAGTTTTGAGCAATTCTGTATCAACTTTGCAAATGAAAAGCTCCAGCAACATTTTAACGAGCATGTATTCAAGATGGAGCAAGAGGAGTATAGTAAAGAAGAAATTAACTGGAGTTACATTGAGTTTATTGACAACCAAGACGTTTTAGACTTGATTGAAAAGAGACCCATTGGTATCATTGCACTGTTGGATGAAGCTTGCATGTTTCCAAAATCGACCCATCAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGGTCTTGCCCAAGGTTGGCAAAAGAAAAGTTCTCAGAAACTGACTTTACCATCTCTCATTATGCTGGAAAGGTTACTTACCATACAGATAGCTTTTTGGACAAAAATCGTGACTATGTTGTTGTTGAACATTGCAATCTATTGTCTTCTTCCAAATGCCCCTTTGTGTGTGAGCTTTTCCCTCAGCTTCCTGAGGAATCTTCTTCTAGGTCGTCATACAAATTTTCTTCTGTAGCCTCCAGATTTAAGCAACAACTTCAAGCATTGATGGAGACTCTTAACACGACAGAGCCTCATTATATACGATGTGTGAAGCCAAATTCTTTGAATCGGCCACAACGCTTTGAGAATTCAAGTGTGATACATCAATTACGCTGTGGGGGAGTTCTTGAGGCTGTTCGAATTAGTCTTGCAGGCTACCCCACTCGTAGGACTTACTCAGAGTTTGTTGATCGCTTTGGGTTGATAGCTCTTGAATTTATGGATGGCAGTTATGATGAAAAAACCACCACTGCGAAAATTTTACAGAAGCTAAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGCATTTTAGATTCCCGGCGTGCGGAAGTGTTGGACAATGCTGCAAAGTGTATTCAGCACCGACTGAGAACATTTGTTGCGCACAGGGAATTTATCTCCATCCGAGCTGCTGCATTTTCTATTCAGGCATACTGCAGGGGATGTCTTGCTCGAAAGATGTATGCTGCTAAACGGGAGACAGCTGCTGCTGTTTTCATTCAGAAATATATTCGTATGTTGTTAATGAAGCATTCGTACATGAAACTATATTCTTCTTCTATAACCATACAGTCCTTTATCCGTGGTTTCACAACTCGCCAAAGGTTCATTCATGGGAAAGAGCACAGAGCTGCTACTGTTATTCAGGCTTGTTGGAAGATGTACAAAATTCGGTCAGTTTTCCAACATCGTCAAACTTCAATTGTGGCAATACAATGTCTATGGCGGCGTAAGCAAGCAAAAAGAGAGCTTCGTAGATTGAAGCAAGAGGCTAATGAAGCCGGTGCCTTGCGTCTGGCCAAGAATAAACTTGAGAAGCAATTGGATGACCTCACATGGCGATTGCATCTTGAAAAAAGATTAAGGGTTTCTAGTGAAGAGGCTAAAGTAGTGGAGATGTCAAAACTTCAAAAGATGCTAGAAGCGCTAAATCTTGAATTGGATGCTGCTAAATTAGCAACAATTAATGAGTGTAACAAGAACGCTATGCTTCAAAATCAATTGGAATTGTCAGTAAAGGAGAAATCAGCTTTACGAAGGGACCTAGCTGCAATGGATGAACTGCAGAAAGAAAATGCTACGCTAAAGAGTTCTTTGGATGCCTTTGAAAAGAAGAATGCAGCTTTAGAGCTTGAGCTTGTGAAGGCTCATAAAGTTAGTGATGAAACCATTGAGAAATTGAGGGAGGTTGAGCAGAAATGTTCTCAATTCCAGCAAAATTTGAAAAGCCTTGAGGAGAAGTTATCAACTTTAGAGGATGAAAATCATGTCCTCCGTCAGAAAGCCTTGAATCCATCTCCTAAGAGTAGCCGACCAGCCATGGCAAAGTCATTCTCAGAAAAATACTCGAATTCAATGGTTCCCCTTACAGAACGAACTGAAAGAAAGCCTATATTTGAGTCACCCACACCCACGAAACTTATTGCCCCATTTCCACTTGGCTTGTCAGACTCTCGTAGATCTAAGTTAACTGCAGAGAGACACCAGGATAACTATGAATTCCTTTCTAGATGTATCAAGGAAGATTTGGGGTTTAAAAATGGTAAACCATTGGCAGCATGCATCATATACAAGTGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGAACAGCCATTTTTGATTACATAATTGAGGGAATTAATGAAGCCTTGAAGGATAGAGATGATGACTCTCTCTTGCCATATTGGCTGTCCAACACCTCCGCACTTTTGTGCCTCCTACAGAGGAACCTACGATCAAATGGCTTTCTAGCTACTACTGCCCAGCGCTACACTGGATCTTCTGGTTTGACGAGCCGAATTGGACATGGACTGAAATCTCCGCTAAAATTCATTGGATATGATGATGGTATGTCACATGTAGAGGCTAGATATCCAGCTATACTTTTCAAACAACAGTTAACTGCTTGTGTCGAGAAGATTTTTGGCCTGATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTTTGAGCTTGTGCATCCAGGCACCAAAAACAGCACGAGTGCACGGGGGGAAATCATCCCGGTCTCCTAGTGGACTTCCTCAGCAATCTCCTGGTGGTCAGTGGGACAACATCATCAAATTTTTGGATTCACTCATGAGCCGACTACGTGGGAATCATGTACCATCCTTCTTCATACGTAAACTAGTTACTCAAGTTTTCTCTTTCATCAATATTACACTCTTCAACAGCCTTCTCTTGCGGCGTGAATGTTGTACATTCTCAAATGGGGAGTATGTGAAATCTGGTCTAGCCGAACTGGAGAAGTGGATAGCTAATGCAAAGGAGGAGTATGCAGGAACATCCTGGCATGAGCTAAACTATATTAGACAGGCTGTTGGGTTTCTGGTGATTCATCAGAAGAGAAAGAAATCCTTGGAGGAGATTCGACTGGATCTTTGTCCGGCATTGACTGTGAGGCAAATCTATCGCATCAGTACTATGTACTGGGATGACAAGTATGGAACGCAGAGTGTATCCAATGAGGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGATAATCAAAACCTGACTTCAAACTCATTCTTGTTGGATGATGATCTGAGCATTCCGTTTTCTGCTGAAGACATAGATATGGCAATATCTGCAATAAATCCTGATGATATTGATCACCCCCCATTTTTGTCGGAATATCCTTGTGCCCAGTTTCTTGTTGCACACTAG 4557 0.4169 MNFRHGSKVWVEDRDLAWVAAEVTGFAGKQAQLVTASGKKVSALPEKLFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPFGELSPHVFAVADASYRAMMDEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVWNDNSSRFGKFVEIQFNSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSSERDAEKYRLGHPSHFHYLNQSKTYELEGVNSAEEYMKTRRAMDIVGICHEDQEAIFRTLAGILHLGNVEFSPGKEHDSSVIKDEKSRFHSQMAADLFMCDVNLLLATLCTRSIQTHEGSIVKALDCNAAVAGRDALAKTIYARLFDWLVEKINKSVGQDKNSRIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKRPIGIIALLDEACMFPKSTHQTFSTKLFQHFRSCPRLAKEKFSETDFTISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLSSSKCPFVCELFPQLPEESSSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQRFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIALEFMDGSYDEKTTTAKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQHRLRTFVAHREFISIRAAAFSIQAYCRGCLARKMYAAKRETAAAVFIQKYIRMLLMKHSYMKLYSSSITIQSFIRGFTTRQRFIHGKEHRAATVIQACWKMYKIRSVFQHRQTSIVAIQCLWRRKQAKRELRRLKQEANEAGALRLAKNKLEKQLDDLTWRLHLEKRLRVSSEEAKVVEMSKLQKMLEALNLELDAAKLATINECNKNAMLQNQLELSVKEKSALRRDLAAMDELQKENATLKSSLDAFEKKNAALELELVKAHKVSDETIEKLREVEQKCSQFQQNLKSLEEKLSTLEDENHVLRQKALNPSPKSSRPAMAKSFSEKYSNSMVPLTERTERKPIFESPTPTKLIAPFPLGLSDSRRSKLTAERHQDNYEFLSRCIKEDLGFKNGKPLAACIIYKCLLHWHAFESERTAIFDYIIEGINEALKDRDDDSLLPYWLSNTSALLCLLQRNLRSNGFLATTAQRYTGSSGLTSRIGHGLKSPLKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSLCIQAPKTARVHGGKSSRSPSGLPQQSPGGQWDNIIKFLDSLMSRLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRLDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAISAINPDDIDHPPFLSEYPCAQFLVAH 1518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1899 1518 SMART DIL_2 1338 1445 IPR002710 -
Acco10g1899 1518 Gene3D Myosin VI head, motor domain, U50 subdomain 308 599 - -
Acco10g1899 1518 Coils Coil 973 1049 - -
Acco10g1899 1518 CDD MYSc_Myo11 73 718 IPR036018 -
Acco10g1899 1518 PANTHER MYOSIN 830 1452 - -
Acco10g1899 1518 Gene3D - 664 731 - -
Acco10g1899 1518 Pfam DIL domain 1339 1442 IPR002710 -
Acco10g1899 1518 CDD MyosinXI_CBD 1114 1486 IPR037975 GO:0007015
Acco10g1899 1518 ProSiteProfiles IQ motif profile. 829 858 IPR000048 GO:0005515
Acco10g1899 1518 SMART MYSc_2a 53 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 ProSiteProfiles IQ motif profile. 852 881 IPR000048 GO:0005515
Acco10g1899 1518 Coils Coil 921 941 - -
Acco10g1899 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 780 IPR027417 -
Acco10g1899 1518 Gene3D - 249 306 - -
Acco10g1899 1518 Gene3D Kinesin motor domain 62 660 IPR036961 -
Acco10g1899 1518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 779 879 IPR027417 -
Acco10g1899 1518 ProSiteProfiles Myosin motor domain profile. 59 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 FunFam Myosin heavy chain 249 303 - -
Acco10g1899 1518 Pfam IQ calmodulin-binding motif 757 774 IPR000048 GO:0005515
Acco10g1899 1518 Pfam IQ calmodulin-binding motif 830 849 IPR000048 GO:0005515
Acco10g1899 1518 Pfam IQ calmodulin-binding motif 807 824 IPR000048 GO:0005515
Acco10g1899 1518 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Acco10g1899 1518 ProSiteProfiles IQ motif profile. 756 785 IPR000048 GO:0005515
Acco10g1899 1518 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 Coils Coil 858 909 - -
Acco10g1899 1518 Gene3D - 732 781 - -
Acco10g1899 1518 Gene3D - 782 830 - -
Acco10g1899 1518 Gene3D - 831 880 - -
Acco10g1899 1518 Pfam Myosin head (motor domain) 61 718 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco10g1899 1518 SMART iq_5 755 777 IPR000048 GO:0005515
Acco10g1899 1518 SMART iq_5 851 873 IPR000048 GO:0005515
Acco10g1899 1518 SMART iq_5 803 825 IPR000048 GO:0005515
Acco10g1899 1518 SMART iq_5 732 754 IPR000048 GO:0005515
Acco10g1899 1518 SMART iq_5 828 850 IPR000048 GO:0005515
Acco10g1899 1518 SMART iq_5 780 802 IPR000048 GO:0005515
Acco10g1899 1518 ProSiteProfiles Dilute domain profile. 1163 1463 IPR002710 -
Acco10g1899 1518 Gene3D - 435 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1899 Acco-ChrAcco10 31850383 31868173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1899 1 1516 Myosins gene family AT4G33200 74.077 0.0 2303