Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1896 ATGACTACCGACGTCGTTGTGTCCTCCGTAATGACAGAGCATGAGAAGTTGGTGACCACGTTAAGACCCTTGATCTTCAGAGCTACCTTGTCGTACTCAGAGGTGACTTTCTCCGATGTGTCAAAGGTTCCAAGCCATATTCATTTCCCTAGGTGCATGATTTATCAAACCGAACGTTCTGAGCTGCACAATAAGAAGAAAAGCACGTCAATGGATCCGCAGAGAAGTCAGGGGCGGAAGAAGGAACCTTGCAGAGGAGCCTGGACACCTGAGGAAGACAAGAAATTGGTTCAAGTCATTGAGTTACATGGCCCTAAGAGGTGGAAGTTTATATCAGCCAAAGCGGGTTTAAATCGATGTGGCAAGAGTTGCAGACTAAGATGGTTAAATTACCTTAGACCCAATATCAAGAGAGGCAATATATCAGACCAAGAAGAGGACTTAATACTCAGGCTCCACAAACTCCTAGGCAACAGGTGGTCTTTGATAGCTGGAAGACTCCCAGGTCGAACTGACAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAAAAGATAAGTCCGAGGAAACAAAACAACAGAGGTTTTAAAAAAGATTATTCCAAGGCGGAGAAAGCTACAGTAACTAGTAGAGATGAAGAACACAGGCCTAAGGTGGTGGTGGAGAAATCAAAGCCAGGCTTTGTTGAAAACCAAGATGAATTGTTCATGATTCCTTGTGGCAGCGAAGGACCGCTAAATTTGGAGTGGGTGAGCAAGTTTCTTGAAATGGACGAGGCTAATTGGTTTGGATTTGCAGATCCGTGA 810 0.442 MTTDVVVSSVMTEHEKLVTTLRPLIFRATLSYSEVTFSDVSKVPSHIHFPRCMIYQTERSELHNKKKSTSMDPQRSQGRKKEPCRGAWTPEEDKKLVQVIELHGPKRWKFISAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKISPRKQNNRGFKKDYSKAEKATVTSRDEEHRPKVVVEKSKPGFVENQDELFMIPCGSEGPLNLEWVSKFLEMDEANWFGFADP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1896 269 MobiDBLite consensus disorder prediction 62 86 - -
Acco10g1896 269 ProSiteProfiles Myb-like domain profile. 80 132 IPR001005 -
Acco10g1896 269 Gene3D - 84 137 - -
Acco10g1896 269 SMART sant 137 185 IPR001005 -
Acco10g1896 269 SMART sant 84 134 IPR001005 -
Acco10g1896 269 Gene3D - 141 216 - -
Acco10g1896 269 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
Acco10g1896 269 Pfam Myb-like DNA-binding domain 85 132 IPR001005 -
Acco10g1896 269 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 76 218 - -
Acco10g1896 269 CDD SANT 87 132 IPR001005 -
Acco10g1896 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 187 IPR017930 -
Acco10g1896 269 MobiDBLite consensus disorder prediction 189 218 - -
Acco10g1896 269 ProSiteProfiles Myb-like domain profile. 133 183 IPR001005 -
Acco10g1896 269 SUPERFAMILY Homeodomain-like 85 179 IPR009057 -
Acco10g1896 269 MobiDBLite consensus disorder prediction 193 218 - -
Acco10g1896 269 CDD SANT 142 183 IPR001005 -
Acco10g1896 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 132 IPR017930 -
Acco10g1896 269 FunFam MYB-related transcription factor 84 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1896 Acco-ChrAcco10 31796744 31800121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1896 78 188 MYB Transcription Factor Family AT5G40330 65.766 8.56e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco10g1896 Myb_DNA-binding 6.3e-19 CL0123