Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1893 ATGCATACCATAACCCATCCCCAAGTATCAGCAAAGATGGCCCAGCGATCTGAACTCACCACAAAAGTTTTGAATGGGGTAACACGGACTCTTATTTCTCTTCTCATTGGAGTGTTCTTGTGGTTCCTTAAGACACTGTCTCTAAAGATATTAGCATCAAAATTCCATGTCAGATCCTTCTTTGATAGAATTCAAGAATCAATCTTTCATCAGTATGTTCTGCAGACACTGTCAGGGCCTCCACTTATAGAGGAGGCAGAGAAGATAGGGAGATCACCTAGTATTGGTCAATTTAGCTTTAGGAGTACAAAAGGTAAAGGAGGCGTAAAGAAAGAGGTCATTGATGTGGCAAAGCTTCACAAGATGAAACAGGAGAAGGTTTCAGCTGGGACCATGAAGATTTTGGTTGGTGCTGTGACAAATTCAAGGCTGTGCACTATCTCTAATGCACTAGATGAAACTTTTGAACAAACTGATAAAGAGATTAGCAATGAGATGGAAGCAACTGTCGCTGCCTATAACATTTTCAGAAATGTTGCAACCCCTGGTTCCTTGTACATTGATGAGGATGACCTTCGGAGGTTTATGATTAAGGAAGAAGTAAATCTGGTGTTTCCTTTGTTTGATGGAGCGAAAACCGGACGAATTGACAGAAAGGCCTTGACAAGCTGGGTGTTGAAGGTTTATCAGGAGCGCAAAGCATTGGCACATGCCTTGGGTGACTCCAAAACAGCAGTGAAACAGCTAAGAAAGCTTGTGACTGGGATTCTGGTGCTTGTGACTGGGATTCTGGTGCTTGTGACCCTAATAGTGTGGCTTCTCCTGATGGAGATTGCCACTACAAAATTACTTTTGTTCTTCTCATCACAGCTAGTACTTGTTACTTTCATGTTTGGAAACACATGCAAGAACATATTTGAAGCTATCATCTTTGTGTTTGTGATGCATCCCTTTGATGTCGGTGTTCAGCTCCTGGTTGAAGAAATGAATATTTTGACCACAGTCTTCTTGAAGCTTAATAATGAAAAGGTGTATTATCCAAACTCAATTCTAGCCACAAAACCCATAAGCAATTATTACAGAAGTCCAGATATGGGAGACACTGTTGAGTTCTGTGTTGACTTCATGACACCATTGGAGAAACTTGGGGCGCTAAAAGAAAAAATAAAGAGTTACTTGGAGAGAAATCCACAACAGTGGCATCCTAATCACAATGTTGTGCTAAAGGAGATTGAAAACGTGAACAAGTTAAAGATGGCTCTGTATGTAAACCACACAATGAACTTTCAAGAGTGGGGAGCGAAGAACACACGAAGAAGTGAACTAGTGACGGAGATGAAGAGAATATTTGAAGAGCTCAACATCAGATACAATCTTCTTCCCCAAGCGGTTCATCTCAGCAATACTGGATCTGACACAACTCCACTTGCAAGATGA 1437 0.412 MHTITHPQVSAKMAQRSELTTKVLNGVTRTLISLLIGVFLWFLKTLSLKILASKFHVRSFFDRIQESIFHQYVLQTLSGPPLIEEAEKIGRSPSIGQFSFRSTKGKGGVKKEVIDVAKLHKMKQEKVSAGTMKILVGAVTNSRLCTISNALDETFEQTDKEISNEMEATVAAYNIFRNVATPGSLYIDEDDLRRFMIKEEVNLVFPLFDGAKTGRIDRKALTSWVLKVYQERKALAHALGDSKTAVKQLRKLVTGILVLVTGILVLVTLIVWLLLMEIATTKLLLFFSSQLVLVTFMFGNTCKNIFEAIIFVFVMHPFDVGVQLLVEEMNILTTVFLKLNNEKVYYPNSILATKPISNYYRSPDMGDTVEFCVDFMTPLEKLGALKEKIKSYLERNPQQWHPNHNVVLKEIENVNKLKMALYVNHTMNFQEWGAKNTRRSELVTEMKRIFEELNIRYNLLPQAVHLSNTGSDTTPLAR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1893 478 SUPERFAMILY Sm-like ribonucleoproteins 307 359 IPR010920 -
Acco10g1893 478 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 14 469 IPR016688 -
Acco10g1893 478 Pfam Mechanosensitive ion channel 263 456 IPR006685 GO:0016020|GO:0055085
Acco10g1893 478 Gene3D - 319 359 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1893 Acco-ChrAcco10 31781142 31783462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1893 15 467 Mechanosensitive Ion Channel Family AT5G12080 63.169 0.0 595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1893 10 31781142 31783462 Acco10g1893 10 31781142 31783462 ECH