Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1892 ATGGATGGCGATAATAGGAATCAAGTTCCAAAACCAGCAGAAGCAAGCATGACGGAGAAGAAAACAGCTAATGCAGGCGAAGTGATGGTGGCGATCTCTGTGCAAGACTCCACAATGGCTGAATGCAATGACGTCATCAATACTGTGTATGCTGCATCAAAGTCTCCGCTTTTAAACGTTGCTTCCCCTGAAATACGTTTCAGTCCCAGCCCAAGGAAGCCACCCAGGCACCCTCTCGGCAACGAAAACCCTGTTCAAAGAAATTCGCTGATGAGGTCAGTGTATTCCAAACCCAAATCAAGATTTGGTGACCAATCTCATTCTTTCGATGCCGCATTGTTTGAGGGTAACAATGATTTCACATTGCAAGAGCAAATGGCTGTTAATTCACCATGTAGAAACTCCTTCAATAAGGGTTCGCCAAATAACAAATCTAGGATTGTCAATAGAACAGCGTCCATAACTTCTTCCATCACTCCCAAGACACCATTCATCGCATCTCCAGGGCCTGCTGGAGAGGATGAGGATGAAATCTTGTGTAGGAGAGTTGAAATGAGTAAAGGGAGGCGCAAGACAGTAACCACTAAGGTTTTGATCGAGTGGGTTGTATTTGTATGCATGATGGGGTGCCTAGTGGCTAGCCTGACTGTTAATAAACTGCAGAACACTATCATTTGGGGCTTGGACTTTTGGAGATGGTGTGTGCTTGTGTTGGTGATCTTTTGTGGCATGTTAGTCACAAATTGGATAATGCGTATAATTGTGTTCTTGATTGAACTGAACTTTTTGCTGAGGAAAAAGGTGCTATATTTTGTTCATGGACTGAAGAAGAGTGTTCAGGTCTTCATTTGGCTGGGTTTGATTCTTCTCACTTGGGTTCTGTTAATCAATCAAAAGGCCCAGCGATCTGAACTCACCACAAAAGTTTTGAATGGGGTAACACAGACTCTTATTTCTCTTCTCATTGGAGTGTTCTTGTGGTTCCTTAAGACACTGTCTCTAAAGATATTAGCATCAAAATTCCATGTCAGATCCTTCTTTGATAGAATTCAAGAATCAATCTTTCATCAGTATGTTCTGCAGACACTGTCAGGGCCTCCACTTATAGAGGAGGCAGAGAAGATAGGGAGATCACCTAGTATTGGTCAATTTAGCTTTAGGAGTACAAAAGGTAAAGGAGGCGTAAAGAAAGAGGTCATTGATGTGGCAAAGCTTCACAAGATGAAACAGGAGAAGGTTTCAGCTGGGACCATGAAGATTTTGGTTGATGCTGTGACAAATTCTAGGTTTTCCACTATCTCTAATGCACTAGATGAAACTTTTGAACAAACTGATAAAGAGATTAGCAATGAGATGGAAGCAACTGTCGCTGCCTATAACATTTTCAGAAATGTTGCAACCCCTGGTTCCTTGTACATTGATGAGGATGACCTTCGGAGGTTTATGATTAAGGAAGAAGTAAATCTGGTGTTTCCTTTGTTTGATGGAGCGAAAACCGGACAAATTGACAGAAAGGCCTTAACAAGCTGGGTGTTGAAGGTTTATCAGGAGCGCAAAGCATTGGCACATGCCTTGGGTGACACCAAAACAGCAGTGAAACAGCTAAGTAAGCTTGTGACAGGGATTCTGGTGCTTGTGACCATAATAGTGTGGCTTCTCCTGATGGAGATTGCCACTACAAAATTACTTTTGTTCTTCTCATCACAGCTAGTACTCGTTACTTTCATGTTTGGAAACACATGCAAGAACATATTTGAAGCTATCATCTTTGTGTTTGTGATGCATCCCTTTGATGTCGGTGATCGGTGTGTTGTTGATGGTGTTCAGCTACTGGTTGAAGAAATGAATATTTTGACCACAGTCTTCTTGAAACTTAATAATGAAAAGGTGTATTATCCAAACTCAATTCTAGCCACAAAACCCATAAGCAATTATTACAGAAGTCCAGATATGGGAGACACTGTTGAGTTCTGTGTTGACTTCATGACACCATTGGAGAAACTTGGGGCGCTAAAAGAAAAAATAAAGAGTTACTTGGAGAGAAATCCACAACATTGGCATCCTAATCACAATGTTGTGCTAAAGGAGATTGAAAACGTGAACAAGTTAAAGATGGCTCTACTTGTAACCCACACAATGAACTTTCAAGAGTGGGGAGCGAAGAACACACGAAGAAGTGAACTAGTGACGGAGATGAAGAGAATATTTGAAGAGCTCAACATCAGATACAATCTTCTTCCCCAAGCGGTTCATCTCAGCAATACTGGACCTGATACAACTCCACTCGCAAGATGA 2295 0.417 MDGDNRNQVPKPAEASMTEKKTANAGEVMVAISVQDSTMAECNDVINTVYAASKSPLLNVASPEIRFSPSPRKPPRHPLGNENPVQRNSLMRSVYSKPKSRFGDQSHSFDAALFEGNNDFTLQEQMAVNSPCRNSFNKGSPNNKSRIVNRTASITSSITPKTPFIASPGPAGEDEDEILCRRVEMSKGRRKTVTTKVLIEWVVFVCMMGCLVASLTVNKLQNTIIWGLDFWRWCVLVLVIFCGMLVTNWIMRIIVFLIELNFLLRKKVLYFVHGLKKSVQVFIWLGLILLTWVLLINQKAQRSELTTKVLNGVTQTLISLLIGVFLWFLKTLSLKILASKFHVRSFFDRIQESIFHQYVLQTLSGPPLIEEAEKIGRSPSIGQFSFRSTKGKGGVKKEVIDVAKLHKMKQEKVSAGTMKILVDAVTNSRFSTISNALDETFEQTDKEISNEMEATVAAYNIFRNVATPGSLYIDEDDLRRFMIKEEVNLVFPLFDGAKTGQIDRKALTSWVLKVYQERKALAHALGDTKTAVKQLSKLVTGILVLVTIIVWLLLMEIATTKLLLFFSSQLVLVTFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVQLLVEEMNILTTVFLKLNNEKVYYPNSILATKPISNYYRSPDMGDTVEFCVDFMTPLEKLGALKEKIKSYLERNPQHWHPNHNVVLKEIENVNKLKMALLVTHTMNFQEWGAKNTRRSELVTEMKRIFEELNIRYNLLPQAVHLSNTGPDTTPLAR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1892 764 Pfam Mechanosensitive ion channel 537 742 IPR006685 GO:0016020|GO:0055085
Acco10g1892 764 FunFam Predicted mechanosensitive ion channel 596 645 - -
Acco10g1892 764 MobiDBLite consensus disorder prediction 1 22 - -
Acco10g1892 764 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 10 758 IPR016688 -
Acco10g1892 764 PIRSF Memb_At2g17000 6 762 IPR016688 -
Acco10g1892 764 MobiDBLite consensus disorder prediction 64 85 - -
Acco10g1892 764 SUPERFAMILY Sm-like ribonucleoproteins 586 645 IPR010920 -
Acco10g1892 764 Gene3D - 596 645 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1892 Acco-ChrAcco10 31777138 31779841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1892 53 753 Mechanosensitive Ion Channel Family AT5G12080 60.253 0.0 849