Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1890 ATGGCAGATCCCAAACCCATAGACACTGTTCCCTATGCCGAACCCCTCGATGCAGATGCCAACTTGATCCTTAATTTCGACGAAAACCTTAACCCCATGCTTCTAAACTCATCCAATAACCACCATGTACAAAACTTTCCCTCCAACTCTTCCTCGGCGATGCCGGAAATGTATGATGATGCTGCTGTACAAGCCTTACTCGCCGACATTAGCCCATATTTAGATCCTATGATTCCTTCCGACAACGCCAGCCAAATCGGCCCTTCTCATCAATTCCCACACCAAAATATTCAAGTAGTCCCTCAACAGATTAATAATCACAGTGCAACAACATTGTGGCCTAACTCACCAATCCCATTGTCTTGCACTTTCTGTCAAGTTCTTCGTGAAATAGTTTATACCGATGGTGTTTTTTTAGTCTCCAGACTTCAAATTCATGGCAAACCTGGAATCATCTCACATGCACTTCTTTATCAGAAAACCGATGCGGGTTCTTCTTCGGCCCAACAACAACCTTTTCAAATAATCGATTTTACCAATAAGAACATGTACCAGATCAAGGCTTTTGTAGCCCGACACTGTTTGAACCAGAATTCAATGGGCTACTTTATGTTGCAAGATTCACTTTCTCTCTATTATGAAACTCTCTGCTGTGGATTGGATTGGGCTGAAGACTTCAAAGATGACCCCACGGACCAAAAACCTCATGATGACAATTCAGGAGGAAAAACTGGTATGGAACAGGAGGTGAAGGCCGGGGATGACATGAAAGCAGCGACCTGGGACACTTTCCTTGCGGAACAGAGGGAGAGGGCGGAGAAGATGAGACTAAGCGATATGAGAGATGTGTTTGGTCTTCCTATTCAAAAAGCAGCCAAGAGGTTGAAGTTATGCCCCACACAAATGAAGAAGATATGTCGTAAACAAGGATTAGAACGATGGCCTCGCAGAAAGGTGAAATGCATAGAGAGGCAAATATCGATATTGAAAAAGGCTCTAGAATCAGAACAAGGTGCAGCAACAAGAGCACAAACTGAAGCAGAAATCGAGAAGCTTGAAAAGGACCTGGTTCGGTACTGTGGTGGATTTCCTCCAACTTCACTGAATATCGAATCAAATTCGTAA 1125 0.4364 MADPKPIDTVPYAEPLDADANLILNFDENLNPMLLNSSNNHHVQNFPSNSSSAMPEMYDDAAVQALLADISPYLDPMIPSDNASQIGPSHQFPHQNIQVVPQQINNHSATTLWPNSPIPLSCTFCQVLREIVYTDGVFLVSRLQIHGKPGIISHALLYQKTDAGSSSAQQQPFQIIDFTNKNMYQIKAFVARHCLNQNSMGYFMLQDSLSLYYETLCCGLDWAEDFKDDPTDQKPHDDNSGGKTGMEQEVKAGDDMKAATWDTFLAEQRERAEKMRLSDMRDVFGLPIQKAAKRLKLCPTQMKKICRKQGLERWPRRKVKCIERQISILKKALESEQGAATRAQTEAEIEKLEKDLVRYCGGFPPTSLNIESNS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1890 374 ProSiteProfiles RWP-RK domain profile. 262 342 IPR003035 -
Acco10g1890 374 MobiDBLite consensus disorder prediction 228 252 - -
Acco10g1890 374 Coils Coil 335 355 - -
Acco10g1890 374 PANTHER PROTEIN RKD4 79 354 IPR044607 GO:0003700
Acco10g1890 374 Pfam RWP-RK domain 275 320 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1890 Acco-ChrAcco10 31759811 31761371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1890 273 339 NLP Transcription Factor Family AT4G24020 43.284 3.00e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Acco10g1890 RWP-RK 7.9e-18 No_clan