Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1885 ATGGAAGCTGGACGCGCTGCGTTGGCTGCGTTCCGTGTTCGTATTAAGGTGGGACCAGTTTTGAGGGATTTCTGTGCTCGTAGAAGCGCTATCATTCAGGCCCTCACTGACGTCTCAATCGGTATATGCTTCTTTTCTGCAGATGTCGATCAGTTCTATGCCCAGTGTGATCCCGACCGTGAAGATCGCATGTCCAGAGATGATTGGCTGAATTTTGTTGCCCATCGCAGCGATCTTTGGTTACTTTCTGTGGCCTTTTTTGAAGCAACGTCCAGTGGATTTTGTAAAAAACATAGGAAGCTTCTGTATAAGAGGATTGACCAGCTTCCTCGAGTATTGGAGGTTGCAAAAATCCGTAGACATGCTCGTGCTCAGGTGCAACGAGTTTTCAATGATTTCAGGGCTCGCGGTAGAGCTCTCACGAGGGCTCTCACTGAGGATTCTCATGAGTTCTACCGGCAGTGTCGTCCTGGCGGGGGGAGTCTCTGCCTATTCGGAGATACTATGGGACTGTGGAGGGTGGGACCCCCAGATGTGAATGTTCCTCCAGGCCTTCCACAACCTTTACGGGGTATCAACTTGTACAGAGATTCAATGCCCTTAGTGACATGGCTATCTTGGGTTGCTCGCTTCAGCGATTTTTGGTTACATTCTCTGGCTTTTTTTGAAGCCGCCAATAATATTGGATTGCATCAAGTTGACAGGCAGCAGGTGCGTGATATGATTGAGCAGCTTCCTACAATATATGACATTGTTCAAAATTATCACCAATTCGTATAG 780 0.4782 MEAGRAALAAFRVRIKVGPVLRDFCARRSAIIQALTDVSIGICFFSADVDQFYAQCDPDREDRMSRDDWLNFVAHRSDLWLLSVAFFEATSSGFCKKHRKLLYKRIDQLPRVLEVAKIRRHARAQVQRVFNDFRARGRALTRALTEDSHEFYRQCRPGGGSLCLFGDTMGLWRVGPPDVNVPPGLPQPLRGINLYRDSMPLVTWLSWVARFSDFWLHSLAFFEAANNIGLHQVDRQQVRDMIEQLPTIYDIVQNYHQFV 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1885 259 PANTHER CPG BINDING PROTEIN 62 117 IPR045104 GO:0006355|GO:0042393
Acco10g1885 259 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Acco10g1885 259 Pfam Alfin 126 253 IPR021998 GO:0006355|GO:0042393
Acco10g1885 259 Pfam Alfin 62 115 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1885 Acco-ChrAcco10 31734553 31737258 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1885 126 252 Alfin-like Transcription Factor Family AT3G42790 42.520 3.32e-22 90.5