Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1872 ATGGTCCCAAACATGAGTGATGATATTTCATCTGAAGGTGACTTCACTAGCCACCGCCAGTGGCCTTTGGAGCTCTCTGATTACTTTAAATTTGATGGTGGTGATCATTGGCCAGACGACGAACAAGATCAGTGTTTTGTTTCTGGTGGTGGGCATGTTCCTAACCAATTGATCTATCAAAACTCCATTGTTGAAGTAGGTGACTTGGGAGGAAGTAGCAGCCACTTTGAAGAGTCTACTGGTAGTGGTGGCACCAACATGATAAATAATGGAAGCCAGAAGAAGGAAGGTAAAGAGAGATTTGCATTCAGAACAAGGTCAGAGGTTGAAATACTGGATGATGGCTACAAGTGGAGAAAGTATGGGAAGAAGATGGTGAAGAACAGCCCCAATCCAAGGAATTACTACAGGTGTTCAGAGGAAGGATGCCCAGTGAAGAAGAGGGTGGAGAGAGATGGAAACGATCCCAAGTATGTAATAACTACGTATGAAGGCGTCCACACTCACAGCAGCTTTTACTAG 522 0.4444 MVPNMSDDISSEGDFTSHRQWPLELSDYFKFDGGDHWPDDEQDQCFVSGGGHVPNQLIYQNSIVEVGDLGGSSSHFEESTGSGGTNMINNGSQKKEGKERFAFRTRSEVEILDDGYKWRKYGKKMVKNSPNPRNYYRCSEEGCPVKKRVERDGNDPKYVITTYEGVHTHSSFY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1872 173 SMART WRKY_cls 112 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g1872 173 ProSiteProfiles WRKY domain profile. 107 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g1872 173 MobiDBLite consensus disorder prediction 70 92 - -
Acco10g1872 173 FunFam WRKY transcription factor 57 98 172 - -
Acco10g1872 173 SUPERFAMILY WRKY DNA-binding domain 104 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g1872 173 Pfam WRKY DNA -binding domain 113 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco10g1872 173 Gene3D WRKY domain 99 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco10g1872 173 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 81 170 IPR044810 GO:0003700
Acco10g1872 173 MobiDBLite consensus disorder prediction 70 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1872 Acco-ChrAcco10 31642151 31643337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1872 30 172 WRKY Transcription Factor Family AT5G26170 49.673 1.02e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco10g1872 WRKY 3.6e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1872 10 31642151 31643337 Acco10g1872 10 31642151 31643337 ECH