Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1871 ATGTCTTCTGCGATTGCAGTGCCATTGAGAGTAGGTAATTCAGTTTGTGATAACCCGACCATAGCTACGCATATGGATGTGTCCAGACTTAAGCTGATGGCTGATGCTGGATTGTTATCTAATTCAATATCCAAGGTTTCAACTGAGACAGTTGCAGATTCTAATGAGGATCGTAATGGCGGGAATCTGGAGAACCAAGTTAGCATTGCTGCAGTCTCATCACCAAAACTTGATAGGGGAGAAGAAATTCCTTTGTTGGATACGATATCCCAAAATAATAGCACATCAGTTGCTGGCGCTGAAGCTTTTACCCCAGAAATTGAGGATGATGATACAATATCGTTGGAGGGTGATCAGATCGTAGACAGCTCTTGTTCTCTTTCGGTAGTCAGTGAGAACAGTAGCATATATGGAGAGGAGTCGGTCAGTTTTGAGGCTACTTCTGAGATAAAGACACCGAGTGTTATTGACATGGAGAAGAGCATCTGTGCCCAGCCTGCTGATTTAGAGGATTCTAATGTTGAGCCAGAAAGTGTTGGTGAACCCCTTGCTGTGGCAGTGAGCCTTGAAGAAGAGTCTAGTGTTGGATCTGGCCCACAGCCTTCTGCAGTTGTTCTTCAGCTGCCTCTAGAAAAAGTGATGAGTGGAACAGGTGGCCGTAGCGTTTTTGAATTAGATTTTGCCCCACTTTGGGGATCCATTTCTGTGTGTGGAAGGAGGCCTGAGATGGAAGATGCAGTTGCAACTGTGCCTCTATTTATGAAAATTCCTATTCAAATGCTTATCAGTGACAGGGCGATAGATGGAATGAGCAAGTGCTTGAGGCAGCAGACAATTCATTTCTTTGGAGTTTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGCCGTGAACGTGTCCATTTGGCTGTGGCTGAGGAAATAGAATTTGTGAAAGAAGGTCTAATAGATGGAAGTATCAAGGACAGCATTCAAGATCATTGGAAAAAAGCCTTCACGAATTGTTTCTTAAAGGTTGATGCCGAAGTTGGGGGAAAAGCTAACTGTGAACCTGTTGCCCCAGAAACCGTTGGCTCCACCGCTGTTGTGGCCATTATTTGTGCCTCTCATATCATTGTTGCAAACTGTGGCGATTCGAGAGCAGTTCTTTGCCGTGGCAAAGAACCCATGGCATTGTCAGTGGATCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAAGCAGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTGTTTGGTGTTCTTGCAATGTCAAGGTCTATAGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTATGTTTCTTCCTCGTGCGAAAGACGACGAATGCCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACAAATGAAGAGGCGTGTGACCTAGCTCGAAGACGAATACTTATGTGGCACAAGAAAAATGGCGTCACACTAGCCCCAGAGAGAGGAGAGGGTGCAGACCCTGCTGCACAAGCAGCGGCAGAGTACCTATCGAGCCGTGCCCTTCAGAAAGGAAGCAAAGATAACATCACAGTAATTGTGGTGGATTTGAAAGCTCAGAGAAAGTTCAAGAGCAAGACATGA 1635 0.452 MSSAIAVPLRVGNSVCDNPTIATHMDVSRLKLMADAGLLSNSISKVSTETVADSNEDRNGGNLENQVSIAAVSSPKLDRGEEIPLLDTISQNNSTSVAGAEAFTPEIEDDDTISLEGDQIVDSSCSLSVVSENSSIYGEESVSFEATSEIKTPSVIDMEKSICAQPADLEDSNVEPESVGEPLAVAVSLEEESSVGSGPQPSAVVLQLPLEKVMSGTGGRSVFELDFAPLWGSISVCGRRPEMEDAVATVPLFMKIPIQMLISDRAIDGMSKCLRQQTIHFFGVYDGHGGSQVANYCRERVHLAVAEEIEFVKEGLIDGSIKDSIQDHWKKAFTNCFLKVDAEVGGKANCEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEACDLARRRILMWHKKNGVTLAPERGEGADPAAQAAAEYLSSRALQKGSKDNITVIVVDLKAQRKFKSKT 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1871 544 Pfam Protein phosphatase 2C 265 527 IPR001932 -
Acco10g1871 544 SUPERFAMILY PP2C-like 227 535 IPR036457 -
Acco10g1871 544 SMART PP2C_4 220 532 IPR001932 -
Acco10g1871 544 CDD PP2Cc 235 534 IPR001932 -
Acco10g1871 544 ProSiteProfiles PPM-type phosphatase domain profile. 230 534 IPR001932 -
Acco10g1871 544 PANTHER PROTEIN PHOSPHATASE 177 534 IPR015655 GO:0004722|GO:0006470
Acco10g1871 544 Gene3D - 217 544 IPR036457 -
Acco10g1871 544 ProSitePatterns PPM-type phosphatase domain signature. 281 289 IPR000222 GO:0043169
Acco10g1871 544 FunFam Protein phosphatase 2C 16 218 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1871 Acco-ChrAcco10 31636802 31640346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1871 1 544 PP2C-type Phosphatase Gene Family AT1G17550 48.654 2.04e-169 488