Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1870 ATGGAGGATCTCGAGGGGGAAGAGAAAATAGAAGAGGAGGTCCTCGGGTCGAGCTTGACCATGGAGAAGGTTGCGGCGGCGAAGAAGTTCATTGAGAATCACTACAAAAATCAGATGAAGAACCTCGAAGAGCGCAAGGAGAGACGTTGGATTTTAGAAAGGAAGTTAGCTTCCTCAGATGTGCCAACCGAGGAAAGGATCAACCTCATCAAAGATTTAGAGAGAAAGGAGACAGAATATATGCGATTGAAAAGACACAAGATATGTGTTAATGATTTTGAGCTCTTAACCATAATAGGAAGAGGGGCCTTTGGGGAGGTTAGATTATGTCGGGAGAAGAAATCTGGAAACATCTATGCCATGAAAAAGCTGAAGAAAACTGAAATGCTCAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTAGCTGAAGTTGCCAGCCATTGCATAGTGAAACTTTACTACTCATTTCAAGACGCTGAGTACTTATATTTAATTATGGAATATCTGCCTGGGGGTGACATGATGACTCTGCTGATGAGAGAAGACACTTTAAGTGAGAATGTTGCTAGGTTTTACATTGCACAAAGTGTGCTGGCCATAGAGTCTATTCATAAACACAATTATATCCACAGGGATATCAAACCAGACAATCTACTTCTAGATATAAACGGTCATATGAAGCTCTCAGATTTCGGCCTTTGTAAGCCACTTGAATTTACTACCCTGTCTACACTTCATGAGAATCAGACCATGGATGATGAAAATTTATCAGAGCCAATGGACATTGATGGGTGCTTTCCTGATACGGACAATCGGAGCAACTGGAAAAGTCCACGTGAACAACTCCAGCATTGGCAGATGAATAGGAGGAAGTTGGCATTTTCTACTGTGGGAACACCAGACTACATTGCTCCCGAAGTTCTGCTGAAAAAAGGATATGGGATGGAATGTGACTGGTGGTCACTGGGGGCAATAATGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCGGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAATCATGTAAAATTTCCGGAAGATGCACAGCTGACACGTGAGGCCAAGGATCTAATATGCAGACTGCTGTGTGATGTTGACCATAGGTTAGGTACTCATGGGGCTAATGAAATCAAGGCTCATCCTTGGTTTAGGGGTGTGGAGTGGGATAAACTGTATGAAATGGAGGCAGCTTTTAAACCACAAGTCAATGGGGAGCTGGACACCCAAAACTTCATAAAATTTGATGAAGTAGATCCACCAACAGCAGCGATAACTGGGTCAGGTCCCTCACGAAAGATGCTACTAACACCCAAAGACCTAAATTTTGTTGGCTACACCTACAAGAACTTTGATGCTGTGAAAGAAGGGCTTCGCCAATCTTTTGCTGATTCCATGCAAGAATTCTCTTCTAAACGGGCAGCTGAGGAAACAAGTTTACAAATGCTTGCTTCGTCTGGGGATCCCATGTTGCCATGA 1527 0.4322 MEDLEGEEKIEEEVLGSSLTMEKVAAAKKFIENHYKNQMKNLEERKERRWILERKLASSDVPTEERINLIKDLERKETEYMRLKRHKICVNDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKTEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDMMTLLMREDTLSENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDINGHMKLSDFGLCKPLEFTTLSTLHENQTMDDENLSEPMDIDGCFPDTDNRSNWKSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHVKFPEDAQLTREAKDLICRLLCDVDHRLGTHGANEIKAHPWFRGVEWDKLYEMEAAFKPQVNGELDTQNFIKFDEVDPPTAAITGSGPSRKMLLTPKDLNFVGYTYKNFDAVKEGLRQSFADSMQEFSSKRAAEETSLQMLASSGDPMLP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1870 508 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Acco10g1870 508 Gene3D Phosphorylase Kinase; domain 1 419 428 - -
Acco10g1870 508 ProSiteProfiles Protein kinase domain profile. 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1870 508 SMART serkin_6 93 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1870 508 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 432 - -
Acco10g1870 508 ProSiteProfiles AGC-kinase C-terminal domain profile. 401 474 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco10g1870 508 Pfam Protein kinase C terminal domain 419 464 IPR017892 GO:0004674|GO:0005524|GO:0006468
Acco10g1870 508 CDD STKc_NDR_like 91 465 - -
Acco10g1870 508 Gene3D Transferase(Phosphotransferase) domain 1 177 244 - -
Acco10g1870 508 Gene3D Transferase(Phosphotransferase) domain 1 299 418 - -
Acco10g1870 508 SUPERFAMILY Protein kinase-like (PK-like) 76 446 IPR011009 -
Acco10g1870 508 FunFam Non-specific serine/threonine protein kinase 299 418 - -
Acco10g1870 508 Pfam Protein kinase domain 94 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1870 508 Pfam Protein kinase domain 292 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1870 508 CDD MobB_NDR_LATS-like 27 88 - -
Acco10g1870 508 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Acco10g1870 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Acco10g1870 508 SMART pkinase_C_6 401 466 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco10g1870 508 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Acco10g1870 508 FunFam Non-specific serine/threonine protein kinase 177 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1870 Acco-ChrAcco10 31618782 31626733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1870 1 507 AGC Kinase Gene Family AT4G33080 79.412 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Acco10g1870 Pkinase 2.1e-42 CL0016