Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1844 ATGGATATCGGAAAACAACGCCAGCAAGATCAAGAGGCAGATATGGATGATTGGAGCAGCGTTCGTGGCCCTAAACATGATAAGGACAGAGAGGAAATCAACAGAAGCAGCATCAGTGGTCACAAGGATTTTTCATCAGCAAAATGGAAGTGTTCAGATCAGATGTGGGTGATGCGAAAAACGAAACAACCGAGCACCTGCCCAGAAAGTAAAAGTACAAAGTGTCACAAGGCATCAAGTTATAGTCCAACATGGCAACAATACCGACGACGACGGCCCTCTAATAACACCAATAGGGTTTGTTCAGATTGCAGCACAACCAGTACTCCACTTTGGAGGAGTGGCCCTAATGGTCCCAAGTCACTTTGCAATGCGTGTGGGATTAGGCAGAGAAAAGCAAGAAAGGCAATGGAAGCAGAAGGTCGTGGATGGTGTGCAAAGTCCAGAATAGTGCATGATAACAAGAGGCAAGTAATTATGATGAAGAACAGGTCTGATTATGAGAGTCGAGGGAAAAGGAAAGTGACTCTCCGGGATTTTGAATTCACTTTTAGCAGAAACTCCGTCGTTTTTCAGCAACCAGTGTTCCCTCGGGATGAAGTAATTGAAGGGGCGATGATTCTCATGGATTTATCTTGTCGCCTTCTTCCCTTTTAG 657 0.4505 MDIGKQRQQDQEADMDDWSSVRGPKHDKDREEINRSSISGHKDFSSAKWKCSDQMWVMRKTKQPSTCPESKSTKCHKASSYSPTWQQYRRRRPSNNTNRVCSDCSTTSTPLWRSGPNGPKSLCNACGIRQRKARKAMEAEGRGWCAKSRIVHDNKRQVIMMKNRSDYESRGKRKVTLRDFEFTFSRNSVVFQQPVFPRDEVIEGAMILMDLSCRLLPF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1844 218 Gene3D - 95 176 IPR013088 GO:0006355|GO:0008270
Acco10g1844 218 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 8 215 - -
Acco10g1844 218 ProSiteProfiles GATA-type zinc finger domain profile. 95 131 IPR000679 GO:0006355|GO:0043565
Acco10g1844 218 CDD ZnF_GATA 100 132 IPR000679 GO:0006355|GO:0043565
Acco10g1844 218 MobiDBLite consensus disorder prediction 1 38 - -
Acco10g1844 218 Pfam GATA zinc finger 101 135 IPR000679 GO:0006355|GO:0043565
Acco10g1844 218 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 92 139 - -
Acco10g1844 218 ProSitePatterns GATA-type zinc finger domain. 101 126 IPR000679 GO:0006355|GO:0043565
Acco10g1844 218 MobiDBLite consensus disorder prediction 1 46 - -
Acco10g1844 218 SMART GATA_3 95 159 IPR000679 GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1844 20 130 C2C2-Gata Transcription Factor Family AT4G26150 41.593 6.38e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco10g1844 GATA 5.5e-17 CL0167