Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1824 ATGATCCGAGAACCAACCCCTTTCGTTCTCCCTAATCTTCAGATTCCTCCTTGGCTCTCTGATAATTCTCTGGGAGCCGCCGCCCCAACATCCCCCTCTTCATTCCCCGTCCCAATCAGCACCGACGCCGGCGCCGTCGACTCCTCCGTCCTCCTCCCCCACCATCACACGCTTCTTTCCAATGATTTTACCCTCCCGGAACTGCACTCTCTTGCTCAAGACTTCGACATCCCCGTCGATGCTTTCTCCTCCGACCAATTCCGCATGTTCGAGTTCAAGATCCGCAGGTGTCCACGTGGCGGCAGGACACATGACTGGACCCGCTGTCCCTTTGCCCATCCCGGAGAGAAGGCTCGCCGCAGAGACCCTCGCAAATTCTCCTACTCCGCCACCCCTTGCCCTGACTTCCGCCATGCAAACTGCGACAAAGGTGATTCCTGCGATTTCGCTCACGGAGTCTTTGAATGTTGGCTTCATCCTTCTCGCTATAGAACTCAACTCTGCAAAGATGCTACCAAATGTCGCCGTCGAGTCTGTTTCTTTGCCCACACTCTCGATCAATTGCGTGTCCTCCCTAGCGCCTCCGTCGCATCACCGGTCGTGTCGCCGATTCGTCGCTCCCTCGATTCATCTAGGAGCGGCTCTTCGTTTATCTCATCACCAACTTCAGTCCTTACGTCATCACCACCTGACAGCTCACCCTTCTCGCCGGGCAAATCCCAGTATGGCGGTGACACATACAATGCAATGAGTGACATAGTAACCTCAACGCGTAATGTTCAGCTCGATTTGAACCGGATGGTTTCTGGTTTTGGTTCTCCCCGTGGTTCGATTCTCCGACCCGAGTTTACCAGCCTTCAGTTGACCCCGAAGTGGGCAAGAACCGATAAATCTGGACCCGGTTCAGCGGACCTCTGGGATAGCAGCCACGAAGAAGAGGTACAGATGGAAAGAGTGGAATCAGGAAGAGACCTTAGAGCCAAAATCTATGCCAAACTCAGGTATGAAACGTCACACGGGCAAAGCAACACGCCTCTATCGCCTCCTGACTTTGGATGGGTCTCGGAACTGGTGAAGTGA 1080 0.5426 MIREPTPFVLPNLQIPPWLSDNSLGAAAPTSPSSFPVPISTDAGAVDSSVLLPHHHTLLSNDFTLPELHSLAQDFDIPVDAFSSDQFRMFEFKIRRCPRGGRTHDWTRCPFAHPGEKARRRDPRKFSYSATPCPDFRHANCDKGDSCDFAHGVFECWLHPSRYRTQLCKDATKCRRRVCFFAHTLDQLRVLPSASVASPVVSPIRRSLDSSRSGSSFISSPTSVLTSSPPDSSPFSPGKSQYGGDTYNAMSDIVTSTRNVQLDLNRMVSGFGSPRGSILRPEFTSLQLTPKWARTDKSGPGSADLWDSSHEEEVQMERVESGRDLRAKIYAKLRYETSHGQSNTPLSPPDFGWVSELVK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1824 359 SMART c3hfinal6 162 185 IPR000571 GO:0046872
Acco10g1824 359 SMART c3hfinal6 127 153 IPR000571 GO:0046872
Acco10g1824 359 Gene3D - 127 190 - -
Acco10g1824 359 MobiDBLite consensus disorder prediction 293 320 - -
Acco10g1824 359 ProSiteProfiles Zinc finger C3H1-type profile. 127 154 IPR000571 GO:0046872
Acco10g1824 359 MobiDBLite consensus disorder prediction 306 320 - -
Acco10g1824 359 MobiDBLite consensus disorder prediction 205 242 - -
Acco10g1824 359 PANTHER UNKEMPT FAMILY MEMBER 54 359 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1824 Acco-ChrAcco10 31278008 31279087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1824 76 191 C2H2 Transcription Factor Family AT5G12850 64.655 3.92e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Acco10g1824 None None None