Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1821 ATGAGAGAGAGAGAGAGAGAGAGGAGGCACACCAAAGTCCAAATTAAACAAGCTCTGAGCGACACTGTGTGTACACATCAAGAAGACATCAACAAGATGGGAAGAGCTCCTTGCTGCGACAAAGCGAGCGTGAAGAGAGGCCCTTGGTCCCCTGAAGAAGATGCTAAGCTCAAGTCCTATATTGAACAACATGGCACCGGCGGTAACTGGATTGCTTTGCCCCAAAAGATCGGGCTAAAGAGATGTGGGAAGAGTTGCCGGCTAAGGTGGCTGAACTACCTTCGGCCTAATATAAAGCATGGGGGTTTCTCCGAGGAAGAAGACAACATCATATGCAGCCTCTACGTTAGCATTGGAAGCAGGTGGTCGGTGATTGCTGCTCAATTGCCAGGAAGAACAGATAATGATATAAAGAACTACTGGAACACAAGGTTGAAGAAGAAGCTTCTGGGAAAGCACCGTAAAGAACATCAGGCACGTTCTAGGGGCAAGAGTAAGCAGGGAGTTATGAATAAGAGTAGTATTGTTGGGATCAATTCATCGATCCTTCCAGAAGAAGATAGTACTGGTCAGGTTCTTGAGGCTCATCAACAAAACCCGTATTGGCCTTGTTACCCCCAGATGATGACGCCTGTGATACCACCCATGTTGTCATACTCAGACCAAGTCCAAGGTTTCAATGACCAGGATTCCATTAGAAAACTTCTTATCAAGCTTGGAGGAACCTTTTCTTACCAGCCTGAAGGGTTCAATTTTCAATTACCAGATGCTACTAGTACTGATCCCTCCGCACAATCACCAATTTATCAAGTTTCTTCTTCTTCTGCTTCTGCTTCTGCAAGTGCTATGAACAATGATAACCAACTAAAATTCCCTCAGCTCCATTACCAATCTGGACTTTGTAGTAACTTGGTGCAAGGAAGCGGCACTTTCAATCAAGCACATGAGGAAATGTCTGTATCTTATCCATCTAGCGAAATGTCGGTATCTTATCCATCTAGCCTAGATGGCCTGGAATATTTCATCAATCATTATGATAAGATAGACACTTCGAGCTCGTGTGACACCAACAACATAGTTTGTCCTCCTTTACTTTCCTCCGATTATGAACAATGTATGCCAAAGCCTCAGGAATTTGCTTTTCAGGAGTTGAGGTATCCAGGCGCCCACTAG 1173 0.4467 MRERERERRHTKVQIKQALSDTVCTHQEDINKMGRAPCCDKASVKRGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEHQARSRGKSKQGVMNKSSIVGINSSILPEEDSTGQVLEAHQQNPYWPCYPQMMTPVIPPMLSYSDQVQGFNDQDSIRKLLIKLGGTFSYQPEGFNFQLPDATSTDPSAQSPIYQVSSSSASASASAMNNDNQLKFPQLHYQSGLCSNLVQGSGTFNQAHEEMSVSYPSSEMSVSYPSSLDGLEYFINHYDKIDTSSSCDTNNIVCPPLLSSDYEQCMPKPQEFAFQELRYPGAH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1821 390 Gene3D - 102 174 - -
Acco10g1821 390 Gene3D - 39 100 - -
Acco10g1821 390 FunFam Transcription factor RAX3 102 175 - -
Acco10g1821 390 PANTHER OS09G0431300 PROTEIN 33 313 - -
Acco10g1821 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Acco10g1821 390 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Acco10g1821 390 CDD SANT 48 94 IPR001005 -
Acco10g1821 390 SUPERFAMILY Homeodomain-like 43 141 IPR009057 -
Acco10g1821 390 ProSiteProfiles Myb-like domain profile. 41 94 IPR001005 -
Acco10g1821 390 FunFam Transcription factor RAX3 39 100 - -
Acco10g1821 390 MobiDBLite consensus disorder prediction 151 170 - -
Acco10g1821 390 CDD SANT 103 145 IPR001005 -
Acco10g1821 390 SMART sant 45 96 IPR001005 -
Acco10g1821 390 SMART sant 99 147 IPR001005 -
Acco10g1821 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 94 IPR017930 -
Acco10g1821 390 Pfam Myb-like DNA-binding domain 101 143 IPR001005 -
Acco10g1821 390 Pfam Myb-like DNA-binding domain 46 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1821 Acco-ChrAcco10 31236747 31238519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1821 33 238 MYB Transcription Factor Family AT3G49690 63.942 3.61e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco10g1821 Myb_DNA-binding 2.1e-14 CL0123