LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g1807	ATGTTCTTCCACCAAGAAGAAGATGCGGTCCAGTTCCCATGTCCGGTTCGGGAAACGGCGGTTCTAACAACTGGGGATATAGAGGAGCTGTTGTCCCTCATCCAATCTGGAGATGAAGAAGACCATAACAACACGACGAGCCCAAGCTCCGGTTCGCAAGGGTCGAGCCGGGAGGTTTACTCCAACGACGAGAGAAAGCGCAGGAGGATGCAGTCGAACCGGGAGTCAGCCCGACGGTCCCGCTGGAGAAAGAAGAGACATTTAGAGGACCTGAACAACCAAGTGAACCGCTTCTCCATTGAAAACCAACAGCTCAAAAGCCGGCTTGGCCTCGCCGTGCATCAAATCCGTCTAGTAAGCTCAGAGAACGAACGCCTGAGAACCGAATCGGTGGTCCTCATGGCCAGACTTTCTGATCTATATTTGATTTTAGGCCCCATGCATAAATAG	450	0.5222	MFFHQEEDAVQFPCPVRETAVLTTGDIEELLSLIQSGDEEDHNNTTSPSSGSQGSSREVYSNDERKRRRMQSNRESARRSRWRKKRHLEDLNNQVNRFSIENQQLKSRLGLAVHQIRLVSSENERLRTESVVLMARLSDLYLILGPMHK	149

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g1807	149	MobiDBLite	consensus disorder prediction	36	86	-	-
	Acco10g1807	149	MobiDBLite	consensus disorder prediction	37	58	-	-
	Acco10g1807	149	Pfam	bZIP transcription factor	65	111	IPR004827	GO:0003700\|GO:0006355
	Acco10g1807	149	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	68	83	IPR004827	GO:0003700\|GO:0006355
	Acco10g1807	149	Gene3D	-	63	113	-	-
	Acco10g1807	149	CDD	bZIP_plant_GBF1	66	115	IPR045314	GO:0003700\|GO:0006355
	Acco10g1807	149	PANTHER	BZIP TRANSCRIPTION FACTOR 44	44	144	-	-
	Acco10g1807	149	Coils	Coil	88	108	-	-
	Acco10g1807	149	FunFam	BZIP transcription factor	63	114	-	-
	Acco10g1807	149	SUPERFAMILY	Leucine zipper domain	65	115	IPR046347	GO:0003700\|GO:0006355
	Acco10g1807	149	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	63	126	IPR004827	GO:0003700\|GO:0006355
	Acco10g1807	149	SMART	brlzneu	61	125	IPR004827	GO:0003700\|GO:0006355
	Acco10g1807	149	MobiDBLite	consensus disorder prediction	59	77	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco10g1807	Acco-ChrAcco10	31117856	31118305	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g1807	25	140	bZIP Transcription Factor Family	AT4G37730	43.651	2.48e-21	85.9

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Acco10g1807		bZIP_1	3e-10	CL0018