Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1800 ATGAATAGGGCTGCTGCGTCTTCAACTTCTCCGTCTTCTTCATCATTCCCACTATCTCTGCTCCTTCTTCTTCTTCTATCTTCACAGGCTTGTTTCACTTTCGCACTCTCTCGCTCGACTGTTACGTTCCTTCCAGGGTTCCAAGGGCCTCTTCCTTTCCATCTTGAAACTGGGTATGTCGGAGTTGGAGAATCAGAGGGTGTGCAGCTCTTCTACTACTTCCTCAAGTCAGACCGAAATCCCAAACATGACCCTTTAATTCTCTGGCTAACTGGGGGCCATGGTTGCTCTGCTTTATCATCTCTTCTCTTTGAAATAGGTCCGCTTCGTTTTCGGATGGAGGAATATAATGGTACTCTGCCTACCCTTGTTTTGAATCCGGAGTCATGGACTAAGATTTCCAGCATAATTTTCTTAGACTTGCCTGCTCTTACTGGATTCTCCTACACAACACTCCCTGTTGCTCCTCAGCGAACTGACTCTAAACAAATCCAACATGCCGTTCAGTTTTTGAGGAAGTGGTTGACTGGTCACCCGGAATTCCAATCGAACCAAATATACATAGGCGGGGACTCATATTCTGGATTGATTGTCCCTGCAGTTGCCCTTGAAATCTCGAATGGAAATGAGAACAGCATAGAGCCATCGGTTAATCTCCAGGGATGTTTGCTAGGAAACCCCTCAACAGACGATGATATAGATAACAACCATAAGATCCCATTTGCTCATGGTATGGGGCTTATTTCTGATGAACTCTATGAGTCTTTGAAAAGTAGTTGTGGGGGAGAATATCACAATGTAGATATCACGAATGAAATGTGTGCCGGATATATTGCAGAATATGAAAAGTGTGTTTCAGGAATAAATCATGCACATATTTTGGAACCCAGATGTCCCTTTGTTTCCCCAAAACCACAAAAGTTCTCTGACAGAAGATCTCTCAATGAGATGCCCGAAACCTTACTCACCTCAGATCCTCAACCACCACTTCCTACTGTAACATGTCGAATTTACGAAGGTTTGCTAGCTCAGTATTGGGCGAATGATGGTTCTGTTCGCAAGGCCCTCGGCATCCGTGAGGGGAGCATAGGGAAATGGGTACGATGTATTGGGACACCTTATACTCAAGAAATTAAAAGCAGTGTCTCATTTCATGTGAACTTGAGTGCTAAAGGTTACCGTGCGCTCATATATAGTGGAGATCATGACTTAATTGTCCCGTTTCGGGGAACTGAAGCGTGGATAAGATCTTTAAACTACTCCATTGTAGATGAATGGAGGCCATGGTCAGTCCAAGGCCAAGTCGCAGGATACACAAGGACATATTCAAATGGGATGACGTACGCGACTGTTAAGGGTGGAGGGCACACAGCTCCCGAGTACAAACCTAAAGAGTGCTTTGCAATGTTTGAGAGGTGGATTTCTCAAATTCCATTGTAA 1440 0.4451 MNRAAASSTSPSSSSFPLSLLLLLLLSSQACFTFALSRSTVTFLPGFQGPLPFHLETGYVGVGESEGVQLFYYFLKSDRNPKHDPLILWLTGGHGCSALSSLLFEIGPLRFRMEEYNGTLPTLVLNPESWTKISSIIFLDLPALTGFSYTTLPVAPQRTDSKQIQHAVQFLRKWLTGHPEFQSNQIYIGGDSYSGLIVPAVALEISNGNENSIEPSVNLQGCLLGNPSTDDDIDNNHKIPFAHGMGLISDELYESLKSSCGGEYHNVDITNEMCAGYIAEYEKCVSGINHAHILEPRCPFVSPKPQKFSDRRSLNEMPETLLTSDPQPPLPTVTCRIYEGLLAQYWANDGSVRKALGIREGSIGKWVRCIGTPYTQEIKSSVSFHVNLSAKGYRALIYSGDHDLIVPFRGTEAWIRSLNYSIVDEWRPWSVQGQVAGYTRTYSNGMTYATVKGGGHTAPEYKPKECFAMFERWISQIPL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1800 479 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Acco10g1800 479 FunFam Serine carboxypeptidase-like 11 35 479 - -
Acco10g1800 479 FunFam Carboxypeptidase 382 476 - -
Acco10g1800 479 Gene3D alpha/beta hydrolase 36 304 IPR029058 -
Acco10g1800 479 FunFam Carboxypeptidase 334 478 - -
Acco10g1800 479 SUPERFAMILY alpha/beta-Hydrolases 41 478 IPR029058 -
Acco10g1800 479 Pfam Serine carboxypeptidase 45 476 IPR001563 GO:0004185|GO:0006508
Acco10g1800 479 Gene3D - 336 478 - -
Acco10g1800 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Acco10g1800 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Acco10g1800 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Acco10g1800 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Acco10g1800 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 463 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1800 Acco-ChrAcco10 31044079 31046888 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1800 35 64 Calmodulin-binding Proteins AT2G22960 66.667 1.07e-06 47.4