Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1787 ATGGGAACAGAGAGTCCGGCTAATTACAACCACATTGGACGGAGTCTCAGTGAATTGTGTATCAACGATAATTCTTCCTCTGCTTTCAGCGATTGTAACAGTGATAGATCTGGCGAATTCCCTACTGCATCTTCCCAGAGCCGCCGTCTTCTTATCGCCTGCGCTGCTGAGAATTCCGATGATTTTATTCGCCAGCTTGTCTCGGATCTCCATTCCACTTCTATTGACGAGCAGAAGCAAGCCGCCTTGGAGATCAGATTGCTCGCCAAGAATAAACCAGAAAATCGCCTCAAAATCGCCGAGGCCGGCGCAATTAAGCCCTTAATCTCGCTTATATCTTCACCTGACCTTCAGCTCCAAGAGTATGGCGTCACCGCTATTCTGAATCTTTCCTTATGCGACGAGAAAAAGGAGCTCATAGCTTCATCGGGAGCGATCAAACCTCTGGTTCGAGCTCTCAAGACAGGAACATCAACCGCTAGAGAGAACGCGGCGTGCGCTCTACTCCGTCTGTCGCAAATTGAGGAGACTAAGATCGTAATTGGAAGGTCAGGAGCCATTCCAGCGCTGGTGAATCTTCTTGAGAACGGGGGGTCCAGAGGGAAGAAAGACGCATCGACGGCACTATACTCGTTGTGTTCGGTGAAGGAGAACAAGATAAGAGCAGTACAGGCAGGAATCATGAGGGCGCTAGTGGAATTGATGGCCGATTTCGGATCAAATATGGTGGACAAATCAGCGTACGTGTTGAGCGTGCTGGTATCGGTGCCGGAGGCGAGGACAGCATTAGTGGAAGAAGGAGGGATTCCGGTGCTGGTGGAAATAATAGAGGTGGGTTCACAGAGGCAGAAGGAAATCGCAGCGGTGATACTGTTGCAGATTTGCGAGGACAGCGTGGCTTATCGTACAATGGTTGCTCGCGAAGGAGCCATTCCTCCCTTGATTGCATTATCACAGTCCGGTACCAATCGGGCCAAACAGAAGGCGGAGACACTTATAGAGCTTCTACGGCAACCAAGATCCGGCAACGTCGCTGCCCGCACCTCGGAAGTGTCGGCATAA 1062 0.5085 MGTESPANYNHIGRSLSELCINDNSSSAFSDCNSDRSGEFPTASSQSRRLLIACAAENSDDFIRQLVSDLHSTSIDEQKQAALEIRLLAKNKPENRLKIAEAGAIKPLISLISSPDLQLQEYGVTAILNLSLCDEKKELIASSGAIKPLVRALKTGTSTARENAACALLRLSQIEETKIVIGRSGAIPALVNLLENGGSRGKKDASTALYSLCSVKENKIRAVQAGIMRALVELMADFGSNMVDKSAYVLSVLVSVPEARTALVEEGGIPVLVEIIEVGSQRQKEIAAVILLQICEDSVAYRTMVAREGAIPPLIALSQSGTNRAKQKAETLIELLRQPRSGNVAARTSEVSA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1787 353 Gene3D - 43 350 IPR011989 -
Acco10g1787 353 PANTHER U BOX DOMAIN-CONTAINING 62 337 - -
Acco10g1787 353 SMART arm_5 298 338 IPR000225 GO:0005515
Acco10g1787 353 SMART arm_5 92 132 IPR000225 GO:0005515
Acco10g1787 353 SMART arm_5 256 296 IPR000225 GO:0005515
Acco10g1787 353 SMART arm_5 174 214 IPR000225 GO:0005515
Acco10g1787 353 SMART arm_5 215 255 IPR000225 GO:0005515
Acco10g1787 353 SMART arm_5 133 173 IPR000225 GO:0005515
Acco10g1787 353 SUPERFAMILY ARM repeat 60 336 IPR016024 -
Acco10g1787 353 FunFam RING-type E3 ubiquitin transferase 52 342 - -
Acco10g1787 353 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Acco10g1787 353 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Acco10g1787 353 Pfam Armadillo/beta-catenin-like repeat 177 214 IPR000225 GO:0005515
Acco10g1787 353 Pfam Armadillo/beta-catenin-like repeat 134 172 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1787 Acco-ChrAcco10 30956657 30958129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1787 63 343 U-box Gene Family AT2G23140 51.957 8.44e-89 278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1997 05 36339844 36341217 Acco10g1787 10 30956657 30958129 CCT