Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1760 ATGGCGTTTCTAAATTCTTCCGTGCTGTTAATCCTTCTCATTTTGGTTCTGTCGTTACAGTGTTCATCTTCATTCTCCGGAAAGGTTTTCTTCCTATCGGTGGAGAATCCAGATAACGTTATAAAATCAAGGAACGAAGTGTTTACTGCTGGATTTTATAATGTTGGCGAGAATGCCTTTGTCTTTGCCATCTGGTTCAGTGAACCTCAAGGCAAAAACGTGACCCCCATTTGGATGGCAAATCGTGACGACCCCGTCAACGGGATAGGCTCAACGCTTACCCTCCATGCTACTGGTAATCTTGTGTTAAATGATGCAGGTCACTTTGATGTTTGGGCCACCAACACCACCTCCACCACCTCTCCAAAATTGGTTCTCAATGATAATGGTAATCTTAATCTTCGTGAATCTAACGGAAAAATCCTATGGCAAAGTTTTGACGATCCAACTGATACACTTGTCCCTGAACAAACTCTCACTAGATTCACAAAGCTCATCTCATCCAGAAGTCAGACTAACTGCTCCTCAGGTTTTTATAAGTTGTTTTTCGACTATGATAATGTTCTTTGTCTTCTCTATGAAGGTCTTGATGTTGCAAGTATCTACTGGCCACATCCTTGGCTCATTAGTTGGGAAGCCGGAAGGTCCACATACAATGCAAGTCGCACTGCAATTCTGAATTCGTATGGTAAATTTAGTTCAACTGATGACCTTACTTTCAAGACATCAGATTATGGCCCTGTGCTTCAGAGAAGATTGACTATTGATTATGATGGTAATCTTCGAGTCTATAGTCGAAAAAGCGGGGGAGAGAAATGGAGTGTTTCATGGCAAGCCCAATCACAACCTTGCAGGATTCATGGCATCTGTGGAGCCAACAGTTTTTGCACCAATGATCCTTATTCTGGTAGAAAATGCTCTTGTCTTCCTGGTTACAAGGTTAAGAATGTAAGTGACTGGTCTTTTGGGTGTGAGCCTGAATTCAATTTGTCTTGTGGCTCAACTGAGTCTCGCTTTTTGCATATAAAAAATTCTGAGTTCTATGGCTATGATCAAGGATACTTCCAAAATTATACTTATCAACAATGTGTGGATGCATGCTTGGAATTGTGTAGCTGCAAAGGATTTCAATATAATTGGATTCCTAAAAATGGCTCTTATACTTGTTACAGAAAGACACGTTTGCTCAACGGGTATGTTTCCCCTAGTTTTCGTGGATCAATTTACTTGAGAGTATCTAAATCTAGCTCCTTCGCTTTTGAAGAATCTAGTGCGAAAAAGTGTGATAGTGTCAACTCTATAATGCTTGAAAGATTGTATGGGTTAAGGCCTGTTAGACTTTTGATAAAGGTGCTATTTTGGTTAGTATTGGCAATTGGGTCCTTTGAAGTTGTGAGCATCTTTCTAGTCTGGTGTCTATTAAGGACACGAGGAAAGTCGAGTACAGATCAACACAACTATCATCTTGTTGCTACTGGATTTAGAAACTATAACTATTCTGAGTTGAAAGAAGCAACAAAAGGGTTCAGTGAAGAGATTGGCCGGGGAGCTGGGGGAATTGTATACAAGGGTGTATTGATAGATCAACGAGTTGCAGCAATCAAAAGACTCAACAAAGCTAGCCAAGATGAAAGTGAATTTTTAGCGGAGCCTCAAAACATACTTTTGGACTCAGAATATCAACCTAAGGTGGCAGATTTTGGGTTGTCTAAATTGGTGAATAGAAATGATAACAACAACTCAGGCTTCTCAACGATCAGAGGAACTAGAGGTTACATGGCACCTGAGTGGGTGTTCAATTTGCCAATTACATCTAAGGTAGATGTGTATAGCTATGGAATTGTTGTGTTGGAGATGATAACGAGAAAAGGCCCGGTGGGGTGCCACATAGTGGATAGGGTAGAGTCGCATCACAGGAGGCTGGTGACATGGGTGAGGGAGAAAAGGAATAATAGAGGAAATGGAACGACGTTGTCATGGGTGGAACAAATCATTGATCCTACAGTTGGGGGAAATTATGAGATTAGGAAGATGGAGATGCTGGCTAGGGTGGCTTTGGATTGTGTTGAGGAAGACAGGGAAGCAAGACCAACGATGAGTCAAGTAGTGGAGAAGCTCCAGGGGTCATGA 2130 0.415 MAFLNSSVLLILLILVLSLQCSSSFSGKVFFLSVENPDNVIKSRNEVFTAGFYNVGENAFVFAIWFSEPQGKNVTPIWMANRDDPVNGIGSTLTLHATGNLVLNDAGHFDVWATNTTSTTSPKLVLNDNGNLNLRESNGKILWQSFDDPTDTLVPEQTLTRFTKLISSRSQTNCSSGFYKLFFDYDNVLCLLYEGLDVASIYWPHPWLISWEAGRSTYNASRTAILNSYGKFSSTDDLTFKTSDYGPVLQRRLTIDYDGNLRVYSRKSGGEKWSVSWQAQSQPCRIHGICGANSFCTNDPYSGRKCSCLPGYKVKNVSDWSFGCEPEFNLSCGSTESRFLHIKNSEFYGYDQGYFQNYTYQQCVDACLELCSCKGFQYNWIPKNGSYTCYRKTRLLNGYVSPSFRGSIYLRVSKSSSFAFEESSAKKCDSVNSIMLERLYGLRPVRLLIKVLFWLVLAIGSFEVVSIFLVWCLLRTRGKSSTDQHNYHLVATGFRNYNYSELKEATKGFSEEIGRGAGGIVYKGVLIDQRVAAIKRLNKASQDESEFLAEPQNILLDSEYQPKVADFGLSKLVNRNDNNNSGFSTIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITRKGPVGCHIVDRVESHHRRLVTWVREKRNNRGNGTTLSWVEQIIDPTVGGNYEIRKMEMLARVALDCVEEDREARPTMSQVVEKLQGS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1760 709 PIRSF SRK 549 709 IPR024171 GO:0004674
Acco10g1760 709 PIRSF SRK 1 550 IPR024171 GO:0004674
Acco10g1760 709 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Acco10g1760 709 Gene3D - 148 275 IPR036426 -
Acco10g1760 709 Pfam D-mannose binding lectin 75 161 IPR001480 -
Acco10g1760 709 Gene3D Transferase(Phosphotransferase) domain 1 554 709 - -
Acco10g1760 709 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Acco10g1760 709 Gene3D Phosphorylase Kinase; domain 1 473 553 - -
Acco10g1760 709 PANTHER OS07G0415500 PROTEIN 4 550 - -
Acco10g1760 709 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Acco10g1760 709 Pfam S-locus glycoprotein domain 239 315 IPR000858 GO:0048544
Acco10g1760 709 CDD EGF 283 312 - -
Acco10g1760 709 CDD PAN_AP_plant 328 413 - -
Acco10g1760 709 SUPERFAMILY Protein kinase-like (PK-like) 494 704 IPR011009 -
Acco10g1760 709 ProSiteProfiles Protein kinase domain profile. 394 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1760 709 CDD B_lectin 43 149 IPR001480 -
Acco10g1760 709 SMART blect_4 32 149 IPR001480 -
Acco10g1760 709 Pfam Protein kinase domain 551 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1760 709 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 206 IPR036426 -
Acco10g1760 709 Gene3D - 33 147 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1760 Acco-ChrAcco10 30753975 30756340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1760 448 709 Receptor kinase-like Gene Family AT1G66930 27.729 1.21e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco10g1760 Pkinase 1.6e-21 CL0016