Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1753 ATGGCGTTTCTAAATTCCTCTGTGCTGTTAATCCTTCTCATTTTGGTTCTGCCGTTACAGTGTTCATCTTCATCCTCCGGCAAGGTTTTCTTCCTATCGGTGGAGAATCCAGATAACGTTATAAAATCAAGGAACGAAGTGTTTACTGCTGGATTTTATAATGTTGGCGAGAATGCCTTTGTCTTTGCCATCTGGTTCAGTGAACCTCAAGGCAAAAACGTGACCCCCATTTGGATGGCAAATCGTGATGACCCGGTCAACGGGATAGGCTCAACGCTTACCCTCCATGCTACTGGTAATCTTGTGCTAAATGATGCAGGTCACTTTGATGTTTGGGCCACCAACACCAGCTCCACCGCCTCTCCAAAATTGGTTCTCAATGATAATGGTAATCTTAATCTTACGGAATCTAACGGCAAAATCCTGTGGCAAAGTTTTGACGATCCAACTGATACACTTGTCCCCGAACAACCTCTCACTAGATTCACAAAGCTCGTCTCGTCCATAAGTCAGACTAACTGCTCTTCAAGTTTTTATAAATTGTTTTTCGATAATGATAATGTTCTTTGTCTTCTCTATGATGGTCTTGATGTTTCAAGTATCTATTGGCCACATCCTTGGCTCAGTAGTTGGAAAGTTGGAAGAACCACATACAATGCAAGTCGCATTGCAATTCTAAATTCGTATGGTAAATTTAGTTCAACTGATCAACTTACTTTCAAGACATCAGATTATGGCCGTGTGCTTCAAAGAAGATTGACTATTGATTATGATGGTAATCTTCGAGTCTACAGTCGAAAAAGCAGAGGAGAGAAATGGAGTGTTTCATGGCAAGCTGAATCACAACCTTGCAAGATTCATGGCATCTGTGGAGCCAACAGTGTTTGCACCAATGATCCTTATATGGGTAGAAAATGCTCGTGTCTTCCTGGTTACAAGGTCAAGAATGTAAGTGAATGGTCTTTTGGGTGTGAGCCTGAATTCAATTTGTCTTGCGGATCAACAGAGTCTCGCTTTTTGCATATAAAAAATTCAGAGTTTTATGGCTATGACCAAGGATACTTCCAAAATTATACTTATAAACAATGTGTGGATGCATGCTTGGAATTGTGTAGCTGCAAAGGATTTCAATATAAATGGATTCCTGAAAATGGCTCTTATACTTGTTACAGAAAGACACGTTTGCTCAACGGGTATGTTTCCCCTAGTTTTTATGGATCAATATACTTGAGAGTATCTAAATCTAGCTCCTTCACTTTTGAACAATCTACTGCGAAGAAGTGTGATAGTGTGAACTCTATAATGCTTGAAAGGTTGTATGCGTTAAGACCTGGCAGACTTTTGATAAAGGTGCTATATTGGTTAGCATTGGCAATTGGGTCCTTTGAAGTTGTGAGCATCTTTCTAGTTTGGTGTCTATTAAGGACAAAAGGAAGGTCGAATTCAAATCAACACAACTATCATCTTGCTGCTATTGGATTTAGAAACTATAACTATTCTGAGTTGAAAGAGGCAACAAAAGGGTTCAGTGAAGAGATTGGCCGGGGAGCTGGGGGAATTGTATACAAGGGTGTATTGACAGATCAACGAGTTGCAGCAATCAAGAGACTCAATGAAGCCAGCCAAGATGAAAGTGAATTTTTAGCCGAGCCTCAAAACATACTTTTGGACTCAGAATATCAACCTAAGGTGGCAGATTTTGGATTGTCTAAATTGGTCAATAGAAATGAAGCCAATAACTCAGGCTTCTCAAGGATCAGAGGAACTAGAGGTTACATGGCACCTGAGTGGGTGTTCAATTTGCCAATTACATCTAAGGTGGATGTATATAGCTATGGAATTGTTGTATTGGAGATGATAACTGGAAAAGGCCAAGTGGGGTCCCACATGGTAGATGGGGTAGAGTCACATCACGGGAGGCTAGTGACATGGGTGAGGGAGAAAATGAATAATAGAGGAAACAAAATGACGTCGTTGTGGGTGGAACAAATCATTGATCCTACGGTTAAGGGAAATTATGAGATTGGGAAGATGGAGATACTAGCTAGGATGGCTTTGGATTGTGTTGAGGAAGGCAGGGATGGAAGACCAACAATGAGCCAAGTAGTGGAGATGCTTTCAGGGTCATGA 2130 0.4089 MAFLNSSVLLILLILVLPLQCSSSSSGKVFFLSVENPDNVIKSRNEVFTAGFYNVGENAFVFAIWFSEPQGKNVTPIWMANRDDPVNGIGSTLTLHATGNLVLNDAGHFDVWATNTSSTASPKLVLNDNGNLNLTESNGKILWQSFDDPTDTLVPEQPLTRFTKLVSSISQTNCSSSFYKLFFDNDNVLCLLYDGLDVSSIYWPHPWLSSWKVGRTTYNASRIAILNSYGKFSSTDQLTFKTSDYGRVLQRRLTIDYDGNLRVYSRKSRGEKWSVSWQAESQPCKIHGICGANSVCTNDPYMGRKCSCLPGYKVKNVSEWSFGCEPEFNLSCGSTESRFLHIKNSEFYGYDQGYFQNYTYKQCVDACLELCSCKGFQYKWIPENGSYTCYRKTRLLNGYVSPSFYGSIYLRVSKSSSFTFEQSTAKKCDSVNSIMLERLYALRPGRLLIKVLYWLALAIGSFEVVSIFLVWCLLRTKGRSNSNQHNYHLAAIGFRNYNYSELKEATKGFSEEIGRGAGGIVYKGVLTDQRVAAIKRLNEASQDESEFLAEPQNILLDSEYQPKVADFGLSKLVNRNEANNSGFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGKGQVGSHMVDGVESHHGRLVTWVREKMNNRGNKMTSLWVEQIIDPTVKGNYEIGKMEILARMALDCVEEGRDGRPTMSQVVEMLSGS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1753 709 ProSiteProfiles Protein kinase domain profile. 394 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1753 709 SMART blect_4 32 149 IPR001480 -
Acco10g1753 709 Gene3D Transferase(Phosphotransferase) domain 1 554 709 - -
Acco10g1753 709 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Acco10g1753 709 Pfam S-locus glycoprotein domain 235 315 IPR000858 GO:0048544
Acco10g1753 709 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 206 IPR036426 -
Acco10g1753 709 Gene3D - 33 147 IPR036426 -
Acco10g1753 709 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Acco10g1753 709 SUPERFAMILY Protein kinase-like (PK-like) 495 706 IPR011009 -
Acco10g1753 709 Pfam PAN-like domain 332 393 IPR003609 -
Acco10g1753 709 Gene3D Phosphorylase Kinase; domain 1 473 553 - -
Acco10g1753 709 CDD EGF 283 312 - -
Acco10g1753 709 CDD PAN_AP_plant 328 413 - -
Acco10g1753 709 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Acco10g1753 709 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Acco10g1753 709 Pfam D-mannose binding lectin 75 160 IPR001480 -
Acco10g1753 709 PANTHER OS07G0415500 PROTEIN 4 550 - -
Acco10g1753 709 Pfam Protein kinase domain 551 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1753 709 PIRSF SRK 1 550 IPR024171 GO:0004674
Acco10g1753 709 PIRSF SRK 550 709 IPR024171 GO:0004674
Acco10g1753 709 CDD B_lectin 43 149 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1753 Acco-ChrAcco10 30714596 30716968 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1753 447 709 Receptor kinase-like Gene Family AT1G66930 28.704 8.94e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco10g1753 Pkinase 2e-19 CL0016